Gene info for Sama_3010 in Shewanella amazonensis SB2B

Updated annotation (from data): Arginine N-succinyltransferase (EC 2.3.1.109)
Rationale: Specifically important for utilizing L-Arginine. Automated validation from mutant phenotype: the predicted function (ARGININE-N-SUCCINYLTRANSFERASE-RXN) was linked to the condition via a MetaCyc pathway. This annotation was also checked manually.
Original annotation: arginine N-succinyltransferase (RefSeq)
Type 1: Protein-coding gene
Located on scaffold 248323, - strand, nucleotides 3,582,765 to 3,583,784
See nucleotide sequence around Sama_3010 or for all of scaffold 248323

Other databases: MicrobesOnline, NCBI, IMG: 2518742280, uniprot: A1SA06

Nearby Genes

500 ntSama_3005 and Sama_3006 overlap by 20 nucleotidesSama_3006 and Sama_3007 overlap by 4 nucleotidesSama_3007 and Sama_3008 are separated by 76 nucleotidesSama_3008 and astD are separated by 144 nucleotidesastD and Sama_3010 are separated by 9 nucleotidesSama_3010 and argD are separated by 163 nucleotidesargD and Sama_3012 are separated by 312 nucleotidesSama_3012 and Sama_3013 are separated by 60 nucleotidesSama_3013 and Sama_3014 are separated by 108 nucleotidesSama_3014 and Sama_3015 are separated by 132 nucleotides Sama_3005: Sama_3005 - hypothetical protein (RefSeq), at 3,577,943 to 3,578,287 _3005 Sama_3006: Sama_3006 - response regulator receiver protein (RefSeq), at 3,578,268 to 3,578,942 _3006 Sama_3007: Sama_3007 - sensor histidine kinase (RefSeq), at 3,578,939 to 3,580,276 _3007 Sama_3008: Sama_3008 - hypothetical protein (RefSeq), at 3,580,353 to 3,581,150 _3008 Sama_3009: astD - Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) (from data), at 3,581,295 to 3,582,755 astD Sama_3010: Sama_3010 - Arginine N-succinyltransferase (EC 2.3.1.109) (from data), at 3,582,765 to 3,583,784 _3010 Sama_3011: argD - bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein (RefSeq), at 3,583,948 to 3,585,162 argD Sama_3012: Sama_3012 - esterase, putative (RefSeq), at 3,585,475 to 3,586,386 _3012 Sama_3013: Sama_3013 - hypothetical protein (RefSeq), at 3,586,447 to 3,587,643 _3013 Sama_3014: Sama_3014 - dipeptidyl peptidase IV, putative (RefSeq), at 3,587,752 to 3,590,226 _3014 Sama_3015: Sama_3015 - para-aminobenzoate synthase glutamine amidotransferase, component II (RefSeq), at 3,590,359 to 3,591,009 _3015
Locus Name Description Strand Phenotype
Sama_3005 Sama_3005 hypothetical protein (RefSeq) + insig.
Sama_3006 Sama_3006 response regulator receiver protein (RefSeq) + insig.
Sama_3007 Sama_3007 sensor histidine kinase (RefSeq) + strong
Sama_3008 Sama_3008 hypothetical protein (RefSeq) - insig.
Sama_3009 astD Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) (from data) - strong
Sama_3010 Sama_3010 Arginine N-succinyltransferase (EC 2.3.1.109) (from data) - strong
Sama_3011 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein (RefSeq) - strong
Sama_3012 Sama_3012 esterase, putative (RefSeq) - insig.
Sama_3013 Sama_3013 hypothetical protein (RefSeq) - insig.
Sama_3014 Sama_3014 dipeptidyl peptidase IV, putative (RefSeq) - insig.
Sama_3015 Sama_3015 para-aminobenzoate synthase glutamine amidotransferase, component II (RefSeq) - insig.

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