Gene info for Sama_2676 in Shewanella amazonensis SB2B

Updated annotation (from data): L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2)
Rationale: Specifically important for utilizing L-Proline. Automated validation from mutant phenotype: the predicted function (1.2.1.88, 1.5.5.2) was linked to the condition via a SEED subsystem. This annotation was also checked manually.
Original annotation: bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase (RefSeq)
Type 1: Protein-coding gene
Located on scaffold 248323, + strand, nucleotides 3,201,868 to 3,205,044
See nucleotide sequence around Sama_2676 or for all of scaffold 248323

Other databases: MicrobesOnline, NCBI, IMG: 2518741943, uniprot: A1S922

Nearby Genes

500 ntSama_2671 and Sama_2672 are separated by 125 nucleotidesSama_2672 and Sama_2673 are separated by 231 nucleotidesSama_2673 and Sama_2674 are separated by 15 nucleotidesSama_2674 and Sama_2675 are separated by 127 nucleotidesSama_2675 and Sama_2676 are separated by 257 nucleotidesSama_2676 and Sama_2677 are separated by 119 nucleotidesSama_2677 and Sama_2678 are separated by 85 nucleotidesSama_2678 and Sama_2679 overlap by 4 nucleotidesSama_2679 and Sama_2680 are separated by 233 nucleotidesSama_2680 and Sama_2681 are separated by 296 nucleotides Sama_2671: Sama_2671 - ion transporter (RefSeq), at 3,196,235 to 3,197,077 _2671 Sama_2672: Sama_2672 - hypothetical protein (RefSeq), at 3,197,203 to 3,198,681 _2672 Sama_2673: Sama_2673 - hypothetical protein (RefSeq), at 3,198,913 to 3,199,593 _2673 Sama_2674: Sama_2674 - phosphate transporter (RefSeq), at 3,199,609 to 3,200,880 _2674 Sama_2675: Sama_2675 - SH3 domain-containing protein (RefSeq), at 3,201,008 to 3,201,610 _2675 Sama_2676: Sama_2676 - L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) (from data), at 3,201,868 to 3,205,044 _2676 Sama_2677: Sama_2677 - hypothetical protein (RefSeq), at 3,205,164 to 3,205,340 _2677 Sama_2678: Sama_2678 - cysteine/glutathione ABC transporter membrane/ATP-binding component (RefSeq), at 3,205,426 to 3,207,153 _2678 Sama_2679: Sama_2679 - cysteine/glutathione ABC transporter membrane/ATP-binding component (RefSeq), at 3,207,150 to 3,208,943 _2679 Sama_2680: Sama_2680 - hypothetical protein (RefSeq), at 3,209,177 to 3,210,439 _2680 Sama_2681: Sama_2681 - nitrite reductase (NO-forming) (RefSeq), at 3,210,736 to 3,211,917 _2681
Locus Name Description Strand Phenotype
Sama_2671 Sama_2671 ion transporter (RefSeq) + insig.
Sama_2672 Sama_2672 hypothetical protein (RefSeq) - strong
Sama_2673 Sama_2673 hypothetical protein (RefSeq) + strong
Sama_2674 Sama_2674 phosphate transporter (RefSeq) + no data
Sama_2675 Sama_2675 SH3 domain-containing protein (RefSeq) + sig.
Sama_2676 Sama_2676 L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) (from data) + strong
Sama_2677 Sama_2677 hypothetical protein (RefSeq) + no data
Sama_2678 Sama_2678 cysteine/glutathione ABC transporter membrane/ATP-binding component (RefSeq) - strong
Sama_2679 Sama_2679 cysteine/glutathione ABC transporter membrane/ATP-binding component (RefSeq) - strong
Sama_2680 Sama_2680 hypothetical protein (RefSeq) - sig.
Sama_2681 Sama_2681 nitrite reductase (NO-forming) (RefSeq) + insig.

Or browse nearby genes

Or see the comparative fitness browser