Gene info for Sama_2060 in Shewanella amazonensis SB2B

Annotation: pseudouridylate synthase (RefSeq)
Type 1: Protein-coding gene
Located on scaffold 248323, + strand, nucleotides 2,496,625 to 2,497,263
See nucleotide sequence around Sama_2060 or for all of scaffold 248323

Other databases: MicrobesOnline, NCBI, IMG: 2518741287, uniprot: A1S7A9

Nearby Genes

500 ntSama_2055 and Sama_2056 are separated by 68 nucleotidesSama_2056 and clpS are separated by 48 nucleotidesclpS and Sama_2058 are separated by 205 nucleotidesSama_2058 and Sama_2059 are separated by 136 nucleotidesSama_2059 and Sama_2060 are separated by 440 nucleotidesSama_2060 and Sama_2061 are separated by 21 nucleotidesSama_2061 and mnmA are separated by 181 nucleotidesmnmA and Sama_2063 are separated by 3 nucleotidesSama_2063 and Sama_2064 are separated by 33 nucleotidesSama_2064 and Sama_2065 are separated by 52 nucleotides Sama_2055: Sama_2055 - translation initiation factor IF-1 (RefSeq), at 2,490,505 to 2,490,723 _2055 Sama_2056: Sama_2056 - ATP-dependent Clp protease, ATP-binding subunit ClpA (RefSeq), at 2,490,792 to 2,493,053 _2056 Sama_2057: clpS - ATP-dependent Clp protease adaptor protein ClpS (RefSeq), at 2,493,102 to 2,493,410 clpS Sama_2058: Sama_2058 - cold-shock DNA-binding domain-containing protein (RefSeq), at 2,493,616 to 2,493,822 _2058 Sama_2059: Sama_2059 - isocitrate dehydrogenase (NADP(+)) (RefSeq), at 2,493,959 to 2,496,184 _2059 Sama_2060: Sama_2060 - pseudouridylate synthase (RefSeq), at 2,496,625 to 2,497,263 _2060 Sama_2061: Sama_2061 - MutT/nudix family protein (RefSeq), at 2,497,285 to 2,497,758 _2061 Sama_2062: mnmA - tRNA-specific 2-thiouridylase MnmA (RefSeq), at 2,497,940 to 2,499,073 mnmA Sama_2063: Sama_2063 - hypothetical protein (RefSeq), at 2,499,077 to 2,499,691 _2063 Sama_2064: Sama_2064 - adenylosuccinate lyase (RefSeq), at 2,499,725 to 2,501,095 _2064 Sama_2065: Sama_2065 - cupin 4 (RefSeq), at 2,501,148 to 2,502,266 _2065
Locus Name Description Strand Phenotype
Sama_2055 Sama_2055 translation initiation factor IF-1 (RefSeq) + no data
Sama_2056 Sama_2056 ATP-dependent Clp protease, ATP-binding subunit ClpA (RefSeq) - strong
Sama_2057 clpS ATP-dependent Clp protease adaptor protein ClpS (RefSeq) - strong
Sama_2058 Sama_2058 cold-shock DNA-binding domain-containing protein (RefSeq) + sig.
Sama_2059 Sama_2059 isocitrate dehydrogenase (NADP(+)) (RefSeq) - strong
Sama_2060 Sama_2060 pseudouridylate synthase (RefSeq) + insig.
Sama_2061 Sama_2061 MutT/nudix family protein (RefSeq) + insig.
Sama_2062 mnmA tRNA-specific 2-thiouridylase MnmA (RefSeq) + no data
Sama_2063 Sama_2063 hypothetical protein (RefSeq) + strong
Sama_2064 Sama_2064 adenylosuccinate lyase (RefSeq) + no data
Sama_2065 Sama_2065 cupin 4 (RefSeq) + insig.

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