Gene info for Sama_2001 in Shewanella amazonensis SB2B

Annotation: GGDEF family protein (RefSeq)
Type 1: Protein-coding gene
Located on scaffold 248323, + strand, nucleotides 2,430,742 to 2,431,785
See nucleotide sequence around Sama_2001 or for all of scaffold 248323

Other databases: MicrobesOnline, NCBI, IMG: 2518741228, uniprot: A1S750

Nearby Genes

500 ntSama_1996 and Sama_1997 are separated by 17 nucleotidesSama_1997 and Sama_1998 are separated by 135 nucleotidesSama_1998 and Sama_1999 are separated by 20 nucleotidesSama_1999 and Sama_2000 are separated by 185 nucleotidesSama_2000 and Sama_2001 are separated by 288 nucleotidesSama_2001 and Sama_2002 overlap by 14 nucleotidesSama_2002 and Sama_2003 overlap by 14 nucleotidesSama_2003 and Sama_2004 are separated by 45 nucleotidesSama_2004 and Sama_2005 are separated by 238 nucleotidesSama_2005 and Sama_2006 overlap by 4 nucleotides Sama_1996: Sama_1996 - diacylglycerol kinase (RefSeq), at 2,426,623 to 2,426,994 _1996 Sama_1997: Sama_1997 - LysR family transcriptional regulator (RefSeq), at 2,427,012 to 2,427,884 _1997 Sama_1998: Sama_1998 - hypothetical protein (RefSeq), at 2,428,020 to 2,428,457 _1998 Sama_1999: Sama_1999 - ribosomal protein S6 modification protein, putative (RefSeq), at 2,428,478 to 2,429,407 _1999 Sama_2000: Sama_2000 - hypothetical protein (RefSeq), at 2,429,593 to 2,430,453 _2000 Sama_2001: Sama_2001 - GGDEF family protein (RefSeq), at 2,430,742 to 2,431,785 _2001 Sama_2002: Sama_2002 - sortase (surface protein transpeptidase)-like protein (RefSeq), at 2,431,772 to 2,432,416 _2002 Sama_2003: Sama_2003 - inter-alpha-trypsin inhibitor domain-containing protein (RefSeq), at 2,432,403 to 2,434,664 _2003 Sama_2004: Sama_2004 - OmpA family protein (RefSeq), at 2,434,710 to 2,435,432 _2004 Sama_2005: Sama_2005 - response regulator receiver protein (RefSeq), at 2,435,671 to 2,436,366 _2005 Sama_2006: Sama_2006 - sensor histidine kinase (RefSeq), at 2,436,363 to 2,438,522 _2006
Locus Name Description Strand Phenotype
Sama_1996 Sama_1996 diacylglycerol kinase (RefSeq) + strong
Sama_1997 Sama_1997 LysR family transcriptional regulator (RefSeq) - strong
Sama_1998 Sama_1998 hypothetical protein (RefSeq) + strong
Sama_1999 Sama_1999 ribosomal protein S6 modification protein, putative (RefSeq) + sig.
Sama_2000 Sama_2000 hypothetical protein (RefSeq) + insig.
Sama_2001 Sama_2001 GGDEF family protein (RefSeq) + insig.
Sama_2002 Sama_2002 sortase (surface protein transpeptidase)-like protein (RefSeq) - insig.
Sama_2003 Sama_2003 inter-alpha-trypsin inhibitor domain-containing protein (RefSeq) - insig.
Sama_2004 Sama_2004 OmpA family protein (RefSeq) - insig.
Sama_2005 Sama_2005 response regulator receiver protein (RefSeq) + insig.
Sama_2006 Sama_2006 sensor histidine kinase (RefSeq) + insig.

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