Gene info for Sama_1522 in Shewanella amazonensis SB2B

Updated annotation (from data): small component of lactate uptake system
Rationale: PFam PF13937.2 (DUF4212). conserved cofit with Sama_1523
Original annotation: hypothetical protein (RefSeq)
Type 1: Protein-coding gene
Located on scaffold 248323, + strand, nucleotides 1,851,483 to 1,851,749
See nucleotide sequence around Sama_1522 or for all of scaffold 248323

Other databases: MicrobesOnline, NCBI, IMG: 2518740719, uniprot: A1S5S3

Nearby Genes

500 ntSama_1517 and Sama_1518 are separated by 122 nucleotidesSama_1518 and Sama_1519 are separated by 523 nucleotidesSama_1519 and Sama_1520 are separated by 66 nucleotidesSama_1520 and Sama_1521 are separated by 78 nucleotidesSama_1521 and Sama_1522 are separated by 256 nucleotidesSama_1522 and Sama_1523 are separated by 11 nucleotidesSama_1523 and Sama_1524 are separated by 141 nucleotidesSama_1524 and Sama_1525 overlap by 1 nucleotidesSama_1525 and Sama_1526 are separated by 84 nucleotidesSama_1526 and Sama_1527 are separated by 161 nucleotides Sama_1517: Sama_1517 - collagenase (RefSeq), at 1,846,415 to 1,847,356 _1517 Sama_1518: Sama_1518 - hypothetical protein (RefSeq), at 1,847,479 to 1,847,970 _1518 Sama_1519: Sama_1519 - putative metal dependent phosphohydrolase (RefSeq), at 1,848,494 to 1,849,708 _1519 Sama_1520: Sama_1520 - NAD-dependent epimerase/dehydratase (RefSeq), at 1,849,775 to 1,850,590 _1520 Sama_1521: Sama_1521 - DsbA family thiol:disulfide interchange protein (RefSeq), at 1,850,669 to 1,851,226 _1521 Sama_1522: Sama_1522 - small component of lactate uptake system (from data), at 1,851,483 to 1,851,749 _1522 Sama_1523: Sama_1523 - actP-like component of lactate uptake system (from data), at 1,851,761 to 1,853,479 _1523 Sama_1524: Sama_1524 - CBS domain-containing protein (RefSeq), at 1,853,621 to 1,855,477 _1524 Sama_1525: Sama_1525 - DNA polymerase III epsilon subunit-related 3'-5' exonuclease-like protein (RefSeq), at 1,855,477 to 1,856,163 _1525 Sama_1526: Sama_1526 - hypothetical protein (RefSeq), at 1,856,248 to 1,856,838 _1526 Sama_1527: Sama_1527 - 3-oxoacyl-(acyl carrier protein) synthase III (RefSeq), at 1,857,000 to 1,858,064 _1527
Locus Name Description Strand Phenotype
Sama_1517 Sama_1517 collagenase (RefSeq) + insig.
Sama_1518 Sama_1518 hypothetical protein (RefSeq) + insig.
Sama_1519 Sama_1519 putative metal dependent phosphohydrolase (RefSeq) + sig.
Sama_1520 Sama_1520 NAD-dependent epimerase/dehydratase (RefSeq) + insig.
Sama_1521 Sama_1521 DsbA family thiol:disulfide interchange protein (RefSeq) + insig.
Sama_1522 Sama_1522 small component of lactate uptake system (from data) + strong
Sama_1523 Sama_1523 actP-like component of lactate uptake system (from data) + strong
Sama_1524 Sama_1524 CBS domain-containing protein (RefSeq) + insig.
Sama_1525 Sama_1525 DNA polymerase III epsilon subunit-related 3'-5' exonuclease-like protein (RefSeq) + strong
Sama_1526 Sama_1526 hypothetical protein (RefSeq) + insig.
Sama_1527 Sama_1527 3-oxoacyl-(acyl carrier protein) synthase III (RefSeq) - strong

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