Gene info for Sama_1357 in Shewanella amazonensis SB2B

Updated annotation (from data): 3-oxoacid CoA-transferase (EC 2.8.3.5), subunit A
Rationale: Specifically important for utilizing L-Leucine. The B subunit is Sama_1356.
Original annotation: 3-oxoacid CoA-transferase (RefSeq)
Type 1: Protein-coding gene
Located on scaffold 248323, - strand, nucleotides 1,645,859 to 1,646,560
See nucleotide sequence around Sama_1357 or for all of scaffold 248323

Other databases: MicrobesOnline, NCBI, IMG: 2518740553, uniprot: A1S5A8

Nearby Genes

500 ntSama_1352 and Sama_1353 are separated by 71 nucleotidesSama_1353 and Sama_1354 are separated by 81 nucleotidesSama_1354 and Sama_1355 are separated by 330 nucleotidesSama_1355 and Sama_1356 are separated by 477 nucleotidesSama_1356 and Sama_1357 are separated by 10 nucleotidesSama_1357 and Sama_1358 are separated by 106 nucleotidesSama_1358 and Sama_1359 are separated by 1 nucleotidesSama_1359 and Sama_1360 are separated by 10 nucleotidesSama_1360 and Sama_1361 are separated by 10 nucleotidesSama_1361 and Sama_1362 are separated by 117 nucleotides Sama_1352: Sama_1352 - hypothetical protein (RefSeq), at 1,641,515 to 1,641,769 _1352 Sama_1353: Sama_1353 - hypothetical protein (RefSeq), at 1,641,841 to 1,642,863 _1353 Sama_1354: Sama_1354 - hypothetical protein (RefSeq), at 1,642,945 to 1,643,427 _1354 Sama_1355: Sama_1355 - phage integrase family site specific recombinase (RefSeq), at 1,643,758 to 1,644,714 _1355 Sama_1356: Sama_1356 - 3-oxoacid CoA-transferase (EC 2.8.3.5), subunit B (from data), at 1,645,192 to 1,645,848 _1356 Sama_1357: Sama_1357 - 3-oxoacid CoA-transferase (EC 2.8.3.5), subunit A (from data), at 1,645,859 to 1,646,560 _1357 Sama_1358: Sama_1358 - pyruvate carboxyltransferase (RefSeq), at 1,646,667 to 1,647,557 _1358 Sama_1359: Sama_1359 - 3-methylcrotonyl-CoA carboxylase, alpha (biotin-containing) subunit (EC 6.4.1.4) (from data), at 1,647,559 to 1,649,580 _1359 Sama_1360: Sama_1360 - enoyl-CoA hydratase/isomerase (RefSeq), at 1,649,591 to 1,650,421 _1360 Sama_1361: Sama_1361 - 3-methylcrotonyl-CoA carboxylase, beta subunit (EC 6.4.1.4) (from data), at 1,650,432 to 1,652,039 _1361 Sama_1362: Sama_1362 - Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) (from data), at 1,652,157 to 1,653,326 _1362
Locus Name Description Strand Phenotype
Sama_1352 Sama_1352 hypothetical protein (RefSeq) - sig.
Sama_1353 Sama_1353 hypothetical protein (RefSeq) - insig.
Sama_1354 Sama_1354 hypothetical protein (RefSeq) - insig.
Sama_1355 Sama_1355 phage integrase family site specific recombinase (RefSeq) + insig.
Sama_1356 Sama_1356 3-oxoacid CoA-transferase (EC 2.8.3.5), subunit B (from data) - sig.
Sama_1357 Sama_1357 3-oxoacid CoA-transferase (EC 2.8.3.5), subunit A (from data) - sig.
Sama_1358 Sama_1358 pyruvate carboxyltransferase (RefSeq) - strong
Sama_1359 Sama_1359 3-methylcrotonyl-CoA carboxylase, alpha (biotin-containing) subunit (EC 6.4.1.4) (from data) - strong
Sama_1360 Sama_1360 enoyl-CoA hydratase/isomerase (RefSeq) - strong
Sama_1361 Sama_1361 3-methylcrotonyl-CoA carboxylase, beta subunit (EC 6.4.1.4) (from data) - strong
Sama_1362 Sama_1362 Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) (from data) - cofit

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