Gene info for Sama_1228 in Shewanella amazonensis SB2B

Annotation: peptidyl-prolyl cis-trans isomerase D (RefSeq)
Type 1: Protein-coding gene
Located on scaffold 248323, + strand, nucleotides 1,511,561 to 1,513,408
See nucleotide sequence around Sama_1228 or for all of scaffold 248323

Other databases: MicrobesOnline, NCBI, IMG: 2518740422, uniprot: A1S4X9

Nearby Genes

500 nttig and clpP are separated by 89 nucleotidesclpP and clpX are separated by 85 nucleotidesclpX and Sama_1226 are separated by 128 nucleotidesSama_1226 and Sama_1227 are separated by 259 nucleotidesSama_1227 and Sama_1228 are separated by 200 nucleotidesSama_1228 and Sama_1229 are separated by 118 nucleotidesSama_1229 and Sama_1230 are separated by 94 nucleotidesSama_1230 and Sama_1231 are separated by 96 nucleotidesSama_1231 and Sama_1232 overlap by 20 nucleotidesSama_1232 and Sama_1233 are separated by 2 nucleotides Sama_1223: tig - trigger factor (RefSeq), at 1,504,977 to 1,506,281 tig Sama_1224: clpP - ATP-dependent Clp protease proteolytic subunit (RefSeq), at 1,506,371 to 1,506,979 clpP Sama_1225: clpX - ATP-dependent protease ATP-binding subunit ClpX (RefSeq), at 1,507,065 to 1,508,342 clpX Sama_1226: Sama_1226 - endopeptidase La (RefSeq), at 1,508,471 to 1,510,828 _1226 Sama_1227: Sama_1227 - HU family DNA-binding protein (RefSeq), at 1,511,088 to 1,511,360 _1227 Sama_1228: Sama_1228 - peptidyl-prolyl cis-trans isomerase D (RefSeq), at 1,511,561 to 1,513,408 _1228 Sama_1229: Sama_1229 - putative uracil-DNA glycosylase (RefSeq), at 1,513,527 to 1,514,183 _1229 Sama_1230: Sama_1230 - trans-2-enoyl-CoA reductase (RefSeq), at 1,514,278 to 1,515,480 _1230 Sama_1231: Sama_1231 - peptide ABC transporter, ATP-binding protein (RefSeq), at 1,515,577 to 1,516,362 _1231 Sama_1232: Sama_1232 - peptide ABC transporter, ATP-binding protein (RefSeq), at 1,516,343 to 1,517,350 _1232 Sama_1233: Sama_1233 - peptide ABC transporter, permease protein (RefSeq), at 1,517,353 to 1,518,243 _1233
Locus Name Description Strand Phenotype
Sama_1223 tig trigger factor (RefSeq) + strong
Sama_1224 clpP ATP-dependent Clp protease proteolytic subunit (RefSeq) + strong
Sama_1225 clpX ATP-dependent protease ATP-binding subunit ClpX (RefSeq) + strong
Sama_1226 Sama_1226 endopeptidase La (RefSeq) + strong
Sama_1227 Sama_1227 HU family DNA-binding protein (RefSeq) + no data
Sama_1228 Sama_1228 peptidyl-prolyl cis-trans isomerase D (RefSeq) + sig.
Sama_1229 Sama_1229 putative uracil-DNA glycosylase (RefSeq) - insig.
Sama_1230 Sama_1230 trans-2-enoyl-CoA reductase (RefSeq) - no data
Sama_1231 Sama_1231 peptide ABC transporter, ATP-binding protein (RefSeq) - strong
Sama_1232 Sama_1232 peptide ABC transporter, ATP-binding protein (RefSeq) - strong
Sama_1233 Sama_1233 peptide ABC transporter, permease protein (RefSeq) - strong

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