Gene info for Sama_1224 in Shewanella amazonensis SB2B

Name: clpP
Annotation: ATP-dependent Clp protease proteolytic subunit (RefSeq)
Type 1: Protein-coding gene
Located on scaffold 248323, + strand, nucleotides 1,506,371 to 1,506,979
See nucleotide sequence around Sama_1224 or for all of scaffold 248323

Other databases: MicrobesOnline, NCBI, IMG: 2518740418, uniprot: A1S4X5

Nearby Genes

500 ntSama_1222 and Sama_R0046 are separated by 237 nucleotidesSama_R0046 and Sama_R0047 are separated by 64 nucleotidesSama_R0047 and Sama_R0048 are separated by 12 nucleotidesSama_R0048 and tig are separated by 252 nucleotidestig and clpP are separated by 89 nucleotidesclpP and clpX are separated by 85 nucleotidesclpX and Sama_1226 are separated by 128 nucleotidesSama_1226 and Sama_1227 are separated by 259 nucleotidesSama_1227 and Sama_1228 are separated by 200 nucleotidesSama_1228 and Sama_1229 are separated by 118 nucleotides Sama_1222: Sama_1222 - methylenetetrahydrofolate dehydrogenase (NADP(+)) (RefSeq), at 1,503,327 to 1,504,181 _1222 Sama_R0046: Sama_R0046 - tRNA-Pro (RefSeq), at 1,504,419 to 1,504,495 _R0046 Sama_R0047: Sama_R0047 - tRNA-Arg (RefSeq), at 1,504,560 to 1,504,636 _R0047 Sama_R0048: Sama_R0048 - tRNA-His (RefSeq), at 1,504,649 to 1,504,724 _R0048 Sama_1223: tig - trigger factor (RefSeq), at 1,504,977 to 1,506,281 tig Sama_1224: clpP - ATP-dependent Clp protease proteolytic subunit (RefSeq), at 1,506,371 to 1,506,979 clpP Sama_1225: clpX - ATP-dependent protease ATP-binding subunit ClpX (RefSeq), at 1,507,065 to 1,508,342 clpX Sama_1226: Sama_1226 - endopeptidase La (RefSeq), at 1,508,471 to 1,510,828 _1226 Sama_1227: Sama_1227 - HU family DNA-binding protein (RefSeq), at 1,511,088 to 1,511,360 _1227 Sama_1228: Sama_1228 - peptidyl-prolyl cis-trans isomerase D (RefSeq), at 1,511,561 to 1,513,408 _1228 Sama_1229: Sama_1229 - putative uracil-DNA glycosylase (RefSeq), at 1,513,527 to 1,514,183 _1229
Locus Name Description Strand Phenotype
Sama_1222 Sama_1222 methylenetetrahydrofolate dehydrogenase (NADP(+)) (RefSeq) - no data
Sama_R0046 Sama_R0046 tRNA-Pro (RefSeq) + no data
Sama_R0047 Sama_R0047 tRNA-Arg (RefSeq) + no data
Sama_R0048 Sama_R0048 tRNA-His (RefSeq) + no data
Sama_1223 tig trigger factor (RefSeq) + strong
Sama_1224 clpP ATP-dependent Clp protease proteolytic subunit (RefSeq) + strong
Sama_1225 clpX ATP-dependent protease ATP-binding subunit ClpX (RefSeq) + strong
Sama_1226 Sama_1226 endopeptidase La (RefSeq) + strong
Sama_1227 Sama_1227 HU family DNA-binding protein (RefSeq) + no data
Sama_1228 Sama_1228 peptidyl-prolyl cis-trans isomerase D (RefSeq) + sig.
Sama_1229 Sama_1229 putative uracil-DNA glycosylase (RefSeq) - insig.

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