Gene info for Sama_1028 in Shewanella amazonensis SB2B

Annotation: LysR family transcriptional regulator (RefSeq)
Type 1: Protein-coding gene
Located on scaffold 248323, + strand, nucleotides 1,243,869 to 1,244,771
See nucleotide sequence around Sama_1028 or for all of scaffold 248323

Other databases: MicrobesOnline, NCBI, IMG: 2518740210, uniprot: A1S4C9

Nearby Genes

500 ntSama_1023 and Sama_1024 overlap by 8 nucleotidesSama_1024 and Sama_1025 are separated by 1 nucleotidesSama_1025 and Sama_1026 are separated by 197 nucleotidesSama_1026 and Sama_1027 are separated by 109 nucleotidesSama_1027 and Sama_1028 are separated by 134 nucleotidesSama_1028 and Sama_1029 overlap by 4 nucleotidesSama_1029 and Sama_1030 are separated by 22 nucleotidesSama_1030 and Sama_1031 overlap by 11 nucleotidesSama_1031 and rumA are separated by 94 nucleotidesrumA and Sama_1033 are separated by 132 nucleotides Sama_1023: Sama_1023 - membrane-bound serine protease (ClpP class)-like protein (RefSeq), at 1,236,632 to 1,238,221 _1023 Sama_1024: Sama_1024 - SPFH domain-containing protein/band 7 family protein (RefSeq), at 1,238,214 to 1,238,996 _1024 Sama_1025: Sama_1025 - thiamine pyrophosphate enzyme-like TPP binding region (RefSeq), at 1,238,998 to 1,240,815 _1025 Sama_1026: Sama_1026 - recombination and repair protein (RefSeq), at 1,241,013 to 1,242,677 _1026 Sama_1027: Sama_1027 - transporter, putative (RefSeq), at 1,242,787 to 1,243,734 _1027 Sama_1028: Sama_1028 - LysR family transcriptional regulator (RefSeq), at 1,243,869 to 1,244,771 _1028 Sama_1029: Sama_1029 - hypothetical protein (RefSeq), at 1,244,768 to 1,245,010 _1029 Sama_1030: Sama_1030 - hypothetical protein (RefSeq), at 1,245,033 to 1,245,638 _1030 Sama_1031: Sama_1031 - hybrid sensory histidine kinase BarA (RefSeq), at 1,245,628 to 1,248,453 _1031 Sama_1032: rumA - 23S rRNA 5-methyluridine methyltransferase (RefSeq), at 1,248,548 to 1,249,879 rumA Sama_1033: Sama_1033 - GTP diphosphokinase (RefSeq), at 1,250,012 to 1,252,216 _1033
Locus Name Description Strand Phenotype
Sama_1023 Sama_1023 membrane-bound serine protease (ClpP class)-like protein (RefSeq) + insig.
Sama_1024 Sama_1024 SPFH domain-containing protein/band 7 family protein (RefSeq) + insig.
Sama_1025 Sama_1025 thiamine pyrophosphate enzyme-like TPP binding region (RefSeq) - insig.
Sama_1026 Sama_1026 recombination and repair protein (RefSeq) - strong
Sama_1027 Sama_1027 transporter, putative (RefSeq) - cofit
Sama_1028 Sama_1028 LysR family transcriptional regulator (RefSeq) + strong
Sama_1029 Sama_1029 hypothetical protein (RefSeq) - insig.
Sama_1030 Sama_1030 hypothetical protein (RefSeq) - insig.
Sama_1031 Sama_1031 hybrid sensory histidine kinase BarA (RefSeq) - strong
Sama_1032 rumA 23S rRNA 5-methyluridine methyltransferase (RefSeq) + sig.
Sama_1033 Sama_1033 GTP diphosphokinase (RefSeq) + strong

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