Gene info for Sama_0945 in Shewanella amazonensis SB2B

Updated annotation (from data): Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6)
Rationale: Specifically important for utilizing N-Acetyl-D-Glucosamine. Automated validation from mutant phenotype: the predicted function (GLUCOSAMINE-6-P-DEAMIN-RXN) was linked to the condition via a MetaCyc pathway. This annotation was also checked manually.
Original annotation: glutamine--fructose-6-phosphate transaminase (isomerizing) (RefSeq)
Type 1: Protein-coding gene
Located on scaffold 248323, + strand, nucleotides 1,144,569 to 1,145,567
See nucleotide sequence around Sama_0945 or for all of scaffold 248323

Other databases: MicrobesOnline, NCBI, IMG: 2518740123, uniprot: A1S446

Nearby Genes

500 ntSama_0940 and Sama_0941 are separated by 1041 nucleotidesSama_0941 and Sama_0942 overlap by 4 nucleotidesSama_0942 and Sama_0943 are separated by 31 nucleotidesSama_0943 and Sama_0944 are separated by 219 nucleotidesSama_0944 and Sama_0945 are separated by 44 nucleotidesSama_0945 and Sama_0946 are separated by 19 nucleotidesSama_0946 and Sama_0947 are separated by 108 nucleotidesSama_0947 and Sama_0948 are separated by 234 nucleotidesSama_0948 and Sama_R0033 are separated by 171 nucleotidesSama_R0033 and Sama_R0034 are separated by 8 nucleotides Sama_0940: Sama_0940 - hypothetical protein (RefSeq), at 1,136,632 to 1,137,324 _0940 Sama_0941: Sama_0941 - type IV pilus assembly protein PilM (RefSeq), at 1,138,366 to 1,139,229 _0941 Sama_0942: Sama_0942 - putative methyl-accepting chemotaxis sensory transducer (RefSeq), at 1,139,226 to 1,140,713 _0942 Sama_0943: Sama_0943 - Beta-N-acetylhexosaminidase (RefSeq), at 1,140,745 to 1,143,399 _0943 Sama_0944: Sama_0944 - N-acetylglucosamine kinase (EC 2.7.1.59) (from data), at 1,143,619 to 1,144,524 _0944 Sama_0945: Sama_0945 - Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) (from data), at 1,144,569 to 1,145,567 _0945 Sama_0946: Sama_0946 - N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) (from data), at 1,145,587 to 1,146,720 _0946 Sama_0947: Sama_0947 - transmembrane glucosamine N-acetyltransferase NagX (from data), at 1,146,829 to 1,147,965 _0947 Sama_0948: Sama_0948 - multiple antibiotic resistance (MarC)-related protein (RefSeq), at 1,148,200 to 1,149,525 _0948 Sama_R0033: Sama_R0033 - tRNA-Thr (RefSeq), at 1,149,697 to 1,149,772 _R0033 Sama_R0034: Sama_R0034 - tRNA-Phe (RefSeq), at 1,149,781 to 1,149,856 _R0034
Locus Name Description Strand Phenotype
Sama_0940 Sama_0940 hypothetical protein (RefSeq) - insig.
Sama_0941 Sama_0941 type IV pilus assembly protein PilM (RefSeq) + insig.
Sama_0942 Sama_0942 putative methyl-accepting chemotaxis sensory transducer (RefSeq) + insig.
Sama_0943 Sama_0943 Beta-N-acetylhexosaminidase (RefSeq) + insig.
Sama_0944 Sama_0944 N-acetylglucosamine kinase (EC 2.7.1.59) (from data) + strong
Sama_0945 Sama_0945 Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) (from data) + strong
Sama_0946 Sama_0946 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) (from data) + strong
Sama_0947 Sama_0947 transmembrane glucosamine N-acetyltransferase NagX (from data) + strong
Sama_0948 Sama_0948 multiple antibiotic resistance (MarC)-related protein (RefSeq) + strong
Sama_R0033 Sama_R0033 tRNA-Thr (RefSeq) - no data
Sama_R0034 Sama_R0034 tRNA-Phe (RefSeq) - no data

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