Gene info for Sama_0794 in Shewanella amazonensis SB2B

Updated annotation (from data): gamma-glutamyl-gamma-aminobutyrate hydrolase (EC: 3.5.1.94)
Rationale: Specifically important for: Putrescine Dihydrochloride. Similar to puuD (PUUD_ECO57), a step in putrescine catabolism. Also, is cofit with other genes from the gamma-glutamyl-putrescine pathway. However another homolog of puuD (Sama_2645) is also important in putrescine utilization and it is not clear why. Both of the homologs in S. amazonensis have conserved active site residues (see aliignments against puuD in PaperBLAST).
Original annotation: hypothetical protein (RefSeq)
Type 1: Protein-coding gene
Located on scaffold 248323, + strand, nucleotides 978,676 to 979,479
See nucleotide sequence around Sama_0794 or for all of scaffold 248323

Other databases: MicrobesOnline, NCBI, IMG: 2518739968, uniprot: A1S3P5

Nearby Genes

500 ntSama_0789 and valS are separated by 104 nucleotidesvalS and Sama_0791 are separated by 15 nucleotidesSama_0791 and Sama_0792 are separated by 130 nucleotidesSama_0792 and Sama_0793 are separated by 119 nucleotidesSama_0793 and Sama_0794 are separated by 293 nucleotidesSama_0794 and Sama_0795 are separated by 76 nucleotidesSama_0795 and Sama_0796 are separated by 222 nucleotidesSama_0796 and Sama_0797 overlap by 4 nucleotidesSama_0797 and Sama_0798 are separated by 159 nucleotidesSama_0798 and Sama_0799 are separated by 3 nucleotides Sama_0789: Sama_0789 - aspartate ammonia-lyase (RefSeq), at 971,562 to 972,980 _0789 Sama_0790: valS - valyl-tRNA synthetase (RefSeq), at 973,085 to 975,946 valS Sama_0791: Sama_0791 - DNA polymerase III, chi subunit (RefSeq), at 975,962 to 976,417 _0791 Sama_0792: Sama_0792 - TetR family transcriptional regulator (RefSeq), at 976,548 to 977,186 _0792 Sama_0793: Sama_0793 - outer membrane protein RomA (RefSeq), at 977,306 to 978,382 _0793 Sama_0794: Sama_0794 - gamma-glutamyl-gamma-aminobutyrate hydrolase (EC: 3.5.1.94) (from data), at 978,676 to 979,479 _0794 Sama_0795: Sama_0795 - leucyl aminopeptidase (RefSeq), at 979,556 to 981,064 _0795 Sama_0796: Sama_0796 - hypothetical protein (RefSeq), at 981,287 to 982,396 _0796 Sama_0797: Sama_0797 - hypothetical protein (RefSeq), at 982,393 to 983,451 _0797 Sama_0798: Sama_0798 - hypothetical protein (RefSeq), at 983,611 to 984,123 _0798 Sama_0799: Sama_0799 - hypothetical protein (RefSeq), at 984,127 to 984,378 _0799
Locus Name Description Strand Phenotype
Sama_0789 Sama_0789 aspartate ammonia-lyase (RefSeq) + strong
Sama_0790 valS valyl-tRNA synthetase (RefSeq) - no data
Sama_0791 Sama_0791 DNA polymerase III, chi subunit (RefSeq) - strong
Sama_0792 Sama_0792 TetR family transcriptional regulator (RefSeq) - strong
Sama_0793 Sama_0793 outer membrane protein RomA (RefSeq) + sig.
Sama_0794 Sama_0794 gamma-glutamyl-gamma-aminobutyrate hydrolase (EC: 3.5.1.94) (from data) + strong
Sama_0795 Sama_0795 leucyl aminopeptidase (RefSeq) - strong
Sama_0796 Sama_0796 hypothetical protein (RefSeq) + no data
Sama_0797 Sama_0797 hypothetical protein (RefSeq) + no data
Sama_0798 Sama_0798 hypothetical protein (RefSeq) - strong
Sama_0799 Sama_0799 hypothetical protein (RefSeq) - insig.

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