Gene info for Sama_0535 in Shewanella amazonensis SB2B

Updated annotation (from data): Aldose 1-epimerase (EC 5.1.3.3)
Rationale: Specifically important for utilizing D-Maltose monohydrate. Automated validation from mutant phenotype: the predicted function (5.1.3.3) was linked to the condition via a SEED subsystem. This annotation was also checked manually.
Original annotation: aldose 1-epimerase (RefSeq)
Type 1: Protein-coding gene
Located on scaffold 248323, - strand, nucleotides 659,093 to 660,118
See nucleotide sequence around Sama_0535 or for all of scaffold 248323

Other databases: MicrobesOnline, NCBI, IMG: 2518739709, uniprot: A1S2Y9

Nearby Genes

500 ntSama_0530 and Sama_0531 are separated by 187 nucleotidesSama_0531 and Sama_0532 are separated by 199 nucleotidesSama_0532 and Sama_0533 are separated by 254 nucleotidesSama_0533 and Sama_0534 are separated by 246 nucleotidesSama_0534 and Sama_0535 are separated by 161 nucleotidesSama_0535 and Sama_0536 are separated by 95 nucleotidesSama_0536 and Sama_0537 are separated by 151 nucleotidesSama_0537 and dipZ are separated by 123 nucleotidesdipZ and Sama_0539 overlap by 4 nucleotidesSama_0539 and Sama_0540 are separated by 212 nucleotides Sama_0530: Sama_0530 - response regulator receiver protein (RefSeq), at 653,396 to 654,574 _0530 Sama_0531: Sama_0531 - YbaK/EbsC protein (RefSeq), at 654,762 to 655,235 _0531 Sama_0532: Sama_0532 - putative methyl-accepting chemotaxis sensory transducer (RefSeq), at 655,435 to 657,006 _0532 Sama_0533: Sama_0533 - alcohol dehydrogenase, zinc-containing (RefSeq), at 657,261 to 658,262 _0533 Sama_0534: Sama_0534 - hypothetical protein (RefSeq), at 658,509 to 658,931 _0534 Sama_0535: Sama_0535 - Aldose 1-epimerase (EC 5.1.3.3) (from data), at 659,093 to 660,118 _0535 Sama_0536: Sama_0536 - galactokinase (RefSeq), at 660,214 to 661,362 _0536 Sama_0537: Sama_0537 - glutathione-regulated potassium-efflux system protein KefC, putative (RefSeq), at 661,514 to 663,121 _0537 Sama_0538: dipZ - thiol:disulfide interchange protein precursor (RefSeq), at 663,245 to 665,068 dipZ Sama_0539: Sama_0539 - periplasmic divalent cation tolerance protein CutA (RefSeq), at 665,065 to 665,397 _0539 Sama_0540: Sama_0540 - FxsA cytoplasmic membrane protein (RefSeq), at 665,610 to 666,200 _0540
Locus Name Description Strand Phenotype
Sama_0530 Sama_0530 response regulator receiver protein (RefSeq) + cofit
Sama_0531 Sama_0531 YbaK/EbsC protein (RefSeq) + strong
Sama_0532 Sama_0532 putative methyl-accepting chemotaxis sensory transducer (RefSeq) + insig.
Sama_0533 Sama_0533 alcohol dehydrogenase, zinc-containing (RefSeq) + sig.
Sama_0534 Sama_0534 hypothetical protein (RefSeq) + strong
Sama_0535 Sama_0535 Aldose 1-epimerase (EC 5.1.3.3) (from data) - sig.
Sama_0536 Sama_0536 galactokinase (RefSeq) - strong
Sama_0537 Sama_0537 glutathione-regulated potassium-efflux system protein KefC, putative (RefSeq) - insig.
Sama_0538 dipZ thiol:disulfide interchange protein precursor (RefSeq) - strong
Sama_0539 Sama_0539 periplasmic divalent cation tolerance protein CutA (RefSeq) - insig.
Sama_0540 Sama_0540 FxsA cytoplasmic membrane protein (RefSeq) + sig.

Or browse nearby genes

Or see the comparative fitness browser