Gene info for Sama_0412 in Shewanella amazonensis SB2B

Updated annotation (from data): Uridine phosphorylase (EC 2.4.2.3)
Rationale: Specifically important for utilizing Cytidine and Uridine. Automated validation from mutant phenotype: the predicted function (URPHOS-RXN) was linked to the condition via a MetaCyc pathway. This annotation was also checked manually.
Original annotation: uridine phosphorylase (RefSeq)
Type 1: Protein-coding gene
Located on scaffold 248323, + strand, nucleotides 508,759 to 509,517
See nucleotide sequence around Sama_0412 or for all of scaffold 248323

Other databases: MicrobesOnline, NCBI, IMG: 2518739585, uniprot: A1S2L6

Nearby Genes

500 ntSama_0407 and Sama_0408 are separated by 27 nucleotidesSama_0408 and Sama_0409 are separated by 141 nucleotidesSama_0409 and Sama_0410 are separated by 306 nucleotidesSama_0410 and Sama_0411 are separated by 85 nucleotidesSama_0411 and Sama_0412 are separated by 437 nucleotidesSama_0412 and Sama_0413 are separated by 57 nucleotidesSama_0413 and Sama_0414 are separated by 396 nucleotidesSama_0414 and Sama_0415 are separated by 18 nucleotidesSama_0415 and Sama_0416 are separated by 12 nucleotidesSama_0416 and Sama_0417 are separated by 329 nucleotides Sama_0407: Sama_0407 - hypothetical protein (RefSeq), at 503,863 to 504,747 _0407 Sama_0408: Sama_0408 - hypothetical protein (RefSeq), at 504,775 to 505,623 _0408 Sama_0409: Sama_0409 - hypothetical protein (RefSeq), at 505,765 to 506,538 _0409 Sama_0410: Sama_0410 - ornithine decarboxylase (RefSeq), at 506,845 to 508,020 _0410 Sama_0411: Sama_0411 - hypothetical protein (RefSeq), at 508,106 to 508,321 _0411 Sama_0412: Sama_0412 - Uridine phosphorylase (EC 2.4.2.3) (from data), at 508,759 to 509,517 _0412 Sama_0413: Sama_0413 - hypothetical protein (RefSeq), at 509,575 to 510,327 _0413 Sama_0414: Sama_0414 - hypothetical protein (RefSeq), at 510,724 to 511,191 _0414 Sama_0415: Sama_0415 - SPFH domain-containing protein/band 7 family protein (RefSeq), at 511,210 to 512,124 _0415 Sama_0416: Sama_0416 - SPFH domain-containing protein/band 7 family protein (RefSeq), at 512,137 to 513,069 _0416 Sama_0417: Sama_0417 - homocysteine S-methyltransferase (RefSeq), at 513,399 to 514,343 _0417
Locus Name Description Strand Phenotype
Sama_0407 Sama_0407 hypothetical protein (RefSeq) + insig.
Sama_0408 Sama_0408 hypothetical protein (RefSeq) - insig.
Sama_0409 Sama_0409 hypothetical protein (RefSeq) - insig.
Sama_0410 Sama_0410 ornithine decarboxylase (RefSeq) + insig.
Sama_0411 Sama_0411 hypothetical protein (RefSeq) - sig.
Sama_0412 Sama_0412 Uridine phosphorylase (EC 2.4.2.3) (from data) + strong
Sama_0413 Sama_0413 hypothetical protein (RefSeq) - insig.
Sama_0414 Sama_0414 hypothetical protein (RefSeq) + insig.
Sama_0415 Sama_0415 SPFH domain-containing protein/band 7 family protein (RefSeq) + insig.
Sama_0416 Sama_0416 SPFH domain-containing protein/band 7 family protein (RefSeq) + insig.
Sama_0417 Sama_0417 homocysteine S-methyltransferase (RefSeq) + insig.

Or browse nearby genes

Or see the comparative fitness browser