Gene info for Sama_0031 in Shewanella amazonensis SB2B

Name: fadA
Updated annotation (from data): Acetyl-CoA C-acyltransferase (EC 2.3.1.16)
Rationale: Specifically important for utilizing Tween 20. Automated validation from mutant phenotype: the predicted function (KETOACYLCOATHIOL-RXN) was linked to the condition via a MetaCyc pathway. This annotation was also checked manually.
Original annotation: 3-ketoacyl-CoA thiolase (RefSeq)
Type 1: Protein-coding gene
Located on scaffold 248323, - strand, nucleotides 33,194 to 34,357
See nucleotide sequence around Sama_0031 or for all of scaffold 248323

Other databases: MicrobesOnline, NCBI, IMG: 2518739173, uniprot: A1S1I7

Nearby Genes

500 ntglyQ and Sama_0027 are separated by 107 nucleotidesSama_0027 and Sama_0028 are separated by 104 nucleotidesSama_0028 and Sama_0029 are separated by 143 nucleotidesSama_0029 and Sama_0030 are separated by 276 nucleotidesSama_0030 and fadA are separated by 64 nucleotidesfadA and fadB are separated by 19 nucleotidesfadB and Sama_0033 are separated by 280 nucleotidesSama_0033 and Sama_0034 are separated by 2 nucleotidesSama_0034 and Sama_0035 are separated by 124 nucleotidesSama_0035 and Sama_0036 overlap by 1 nucleotides Sama_0026: glyQ - glycyl-tRNA synthetase subunit alpha (RefSeq), at 25,552 to 26,457 glyQ Sama_0027: Sama_0027 - DNA-3-methyladenine glycosylase I (RefSeq), at 26,565 to 27,134 _0027 Sama_0028: Sama_0028 - amidohydrolase (RefSeq), at 27,239 to 30,427 _0028 Sama_0029: Sama_0029 - redox protein regulator of disulfide bond formation (RefSeq), at 30,571 to 30,870 _0029 Sama_0030: Sama_0030 - putative methyl-accepting chemotaxis sensory transducer (RefSeq), at 31,147 to 33,129 _0030 Sama_0031: fadA - Acetyl-CoA C-acyltransferase (EC 2.3.1.16) (from data), at 33,194 to 34,357 fadA Sama_0032: fadB - Enoyl-CoA hydratase (EC 4.2.1.17); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) (from data), at 34,377 to 36,527 fadB Sama_0033: Sama_0033 - proline dipeptidase (RefSeq), at 36,808 to 38,127 _0033 Sama_0034: Sama_0034 - hypothetical protein (RefSeq), at 38,130 to 38,750 _0034 Sama_0035: Sama_0035 - TrkH family potassium uptake protein (RefSeq), at 38,875 to 40,332 _0035 Sama_0036: Sama_0036 - protoporphyrinogen oxidase (RefSeq), at 40,332 to 40,865 _0036
Locus Name Description Strand Phenotype
Sama_0026 glyQ glycyl-tRNA synthetase subunit alpha (RefSeq) - no data
Sama_0027 Sama_0027 DNA-3-methyladenine glycosylase I (RefSeq) + insig.
Sama_0028 Sama_0028 amidohydrolase (RefSeq) - insig.
Sama_0029 Sama_0029 redox protein regulator of disulfide bond formation (RefSeq) - no data
Sama_0030 Sama_0030 putative methyl-accepting chemotaxis sensory transducer (RefSeq) + insig.
Sama_0031 fadA Acetyl-CoA C-acyltransferase (EC 2.3.1.16) (from data) - strong
Sama_0032 fadB Enoyl-CoA hydratase (EC 4.2.1.17); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) (from data) - strong
Sama_0033 Sama_0033 proline dipeptidase (RefSeq) + insig.
Sama_0034 Sama_0034 hypothetical protein (RefSeq) + insig.
Sama_0035 Sama_0035 TrkH family potassium uptake protein (RefSeq) + strong
Sama_0036 Sama_0036 protoporphyrinogen oxidase (RefSeq) + sig.

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