Gene info for Sama_0008 in Shewanella amazonensis SB2B

Name: trmE
Annotation: tRNA modification GTPase TrmE (RefSeq)
Type 1: Protein-coding gene
Located on scaffold 248323, - strand, nucleotides 6,502 to 7,863
See nucleotide sequence around Sama_0008 or for all of scaffold 248323

Other databases: MicrobesOnline, NCBI, IMG: 2518739150, uniprot: A1S1G4

Nearby Genes

500 ntSama_0003 and Sama_0004 are separated by 9 nucleotidesSama_0004 and Sama_0005 are separated by 175 nucleotidesSama_0005 and Sama_0006 are separated by 127 nucleotidesSama_0006 and Sama_0007 are separated by 108 nucleotidesSama_0007 and trmE are separated by 100 nucleotidestrmE and Sama_0009 are separated by 87 nucleotidesSama_0009 and Sama_0010 are separated by 4 nucleotidesSama_0010 and Sama_0011 overlap by 34 nucleotidesSama_0011 and rpmH are separated by 16 nucleotidesrpmH and dnaA are separated by 462 nucleotides Sama_0003: Sama_0003 - carboxylesterase (RefSeq), at 1,522 to 2,367 _0003 Sama_0004: Sama_0004 - alcohol dehydrogenase, zinc-binding (RefSeq), at 2,377 to 3,510 _0004 Sama_0005: Sama_0005 - LysR, substrate-binding (RefSeq), at 3,686 to 4,558 _0005 Sama_0006: Sama_0006 - hypothetical protein (RefSeq), at 4,686 to 5,186 _0006 Sama_0007: Sama_0007 - oxidoreductase, FAD/FMN-binding (RefSeq), at 5,295 to 6,401 _0007 Sama_0008: trmE - tRNA modification GTPase TrmE (RefSeq), at 6,502 to 7,863 trmE Sama_0009: Sama_0009 - inner membrane protein, 60 kDa (RefSeq), at 7,951 to 9,576 _0009 Sama_0010: Sama_0010 - hypothetical protein (RefSeq), at 9,581 to 9,835 _0010 Sama_0011: Sama_0011 - ribonuclease P protein component (RefSeq), at 9,802 to 10,158 _0011 Sama_0012: rpmH - 50S ribosomal protein L34 (RefSeq), at 10,175 to 10,312 rpmH Sama_0013: dnaA - chromosomal replication initiation protein (RefSeq), at 10,775 to 12,148 dnaA
Locus Name Description Strand Phenotype
Sama_0003 Sama_0003 carboxylesterase (RefSeq) - sig.
Sama_0004 Sama_0004 alcohol dehydrogenase, zinc-binding (RefSeq) - insig.
Sama_0005 Sama_0005 LysR, substrate-binding (RefSeq) + insig.
Sama_0006 Sama_0006 hypothetical protein (RefSeq) + insig.
Sama_0007 Sama_0007 oxidoreductase, FAD/FMN-binding (RefSeq) + insig.
Sama_0008 trmE tRNA modification GTPase TrmE (RefSeq) - no data
Sama_0009 Sama_0009 inner membrane protein, 60 kDa (RefSeq) - no data
Sama_0010 Sama_0010 hypothetical protein (RefSeq) - strong
Sama_0011 Sama_0011 ribonuclease P protein component (RefSeq) - no data
Sama_0012 rpmH 50S ribosomal protein L34 (RefSeq) - no data
Sama_0013 dnaA chromosomal replication initiation protein (RefSeq) + no data

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