Gene info for Shew_3428 in Shewanella loihica PV-4

Annotation: diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq)
Type 1: Protein-coding gene
Located on scaffold 113993, - strand, nucleotides 4,087,739 to 4,092,193
See nucleotide sequence around Shew_3428 or for all of scaffold 113993

Other databases: MicrobesOnline, NCBI, uniprot: A3QIJ6

Nearby Genes

500 ntShew_3423 and Shew_3424 are separated by 109 nucleotidesShew_3424 and Shew_3425 are separated by 413 nucleotidesShew_3425 and Shew_3426 are separated by 87 nucleotidesShew_3426 and Shew_3427 are separated by 131 nucleotidesShew_3427 and Shew_3428 are separated by 95 nucleotidesShew_3428 and Shew_3429 are separated by 142 nucleotidesShew_3429 and Shew_3430 are separated by 153 nucleotidesShew_3430 and aceE are separated by 11 nucleotidesaceE and pdhR are separated by 69 nucleotidespdhR and Shew_3433 are separated by 238 nucleotides Shew_3423: Shew_3423 - anti-RNA polymerase sigma 70 factor (RefSeq), at 4,078,894 to 4,079,364 _3423 Shew_3424: Shew_3424 - bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase (RefSeq), at 4,079,474 to 4,082,071 _3424 Shew_3425: Shew_3425 - 2-deoxyglucose-6-phosphatase (RefSeq), at 4,082,485 to 4,083,156 _3425 Shew_3426: Shew_3426 - endothelin-converting protein 1 (RefSeq), at 4,083,244 to 4,085,298 _3426 Shew_3427: Shew_3427 - patatin (RefSeq), at 4,085,430 to 4,087,643 _3427 Shew_3428: Shew_3428 - diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq), at 4,087,739 to 4,092,193 _3428 Shew_3429: Shew_3429 - dihydrolipoamide dehydrogenase (RefSeq), at 4,092,336 to 4,093,763 _3429 Shew_3430: Shew_3430 - pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase (RefSeq), at 4,093,917 to 4,095,869 _3430 Shew_3431: aceE - pyruvate dehydrogenase subunit E1 (RefSeq), at 4,095,881 to 4,098,547 aceE Shew_3432: pdhR - transcriptional regulator PdhR (RefSeq), at 4,098,617 to 4,099,369 pdhR Shew_3433: Shew_3433 - regulatory protein AmpE (RefSeq), at 4,099,608 to 4,100,459 _3433
Locus Name Description Strand Phenotype
Shew_3423 Shew_3423 anti-RNA polymerase sigma 70 factor (RefSeq) + insig.
Shew_3424 Shew_3424 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase (RefSeq) - no data
Shew_3425 Shew_3425 2-deoxyglucose-6-phosphatase (RefSeq) + insig.
Shew_3426 Shew_3426 endothelin-converting protein 1 (RefSeq) - insig.
Shew_3427 Shew_3427 patatin (RefSeq) - strong
Shew_3428 Shew_3428 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq) - insig.
Shew_3429 Shew_3429 dihydrolipoamide dehydrogenase (RefSeq) - no data
Shew_3430 Shew_3430 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase (RefSeq) - strong
Shew_3431 aceE pyruvate dehydrogenase subunit E1 (RefSeq) - strong
Shew_3432 pdhR transcriptional regulator PdhR (RefSeq) - strong
Shew_3433 Shew_3433 regulatory protein AmpE (RefSeq) - insig.

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