Gene info for Shew_3118 in Shewanella loihica PV-4

Updated annotation (from data): smc-like chromosome partitioning protein (DUF3584)
Rationale: Conserved phenotypes: important for motility and cisplatin resistance. DUF3584 is distantly related to smc proteins.
Original annotation: hypothetical protein (RefSeq)
Type 1: Protein-coding gene
Located on scaffold 113993, - strand, nucleotides 3,702,599 to 3,706,270
See nucleotide sequence around Shew_3118 or for all of scaffold 113993

Other databases: MicrobesOnline, NCBI, uniprot: A3QHN6

Nearby Genes

500 ntShew_3113 and Shew_3114 are separated by 9 nucleotidesShew_3114 and Shew_3115 are separated by 61 nucleotidesShew_3115 and Shew_3116 are separated by 536 nucleotidesShew_3116 and Shew_3117 are separated by 1 nucleotidesShew_3117 and Shew_3118 are separated by 0 nucleotidesShew_3118 and Shew_3119 are separated by 427 nucleotidesShew_3119 and Shew_3120 are separated by 576 nucleotidesShew_3120 and Shew_3121 are separated by 152 nucleotidesShew_3121 and Shew_3122 are separated by 168 nucleotidesShew_3122 and Shew_3123 are separated by 132 nucleotides Shew_3113: Shew_3113 - histidine kinase (RefSeq), at 3,695,449 to 3,697,413 _3113 Shew_3114: Shew_3114 - two component, sigma54 specific, Fis family transcriptional regulator (RefSeq), at 3,697,423 to 3,698,811 _3114 Shew_3115: Shew_3115 - sodium:dicarboxylate symporter (RefSeq), at 3,698,873 to 3,700,186 _3115 Shew_3116: Shew_3116 - predicted chromosome partitioning protein (with smc-like Shew_3118) (from data), at 3,700,723 to 3,701,943 _3116 Shew_3117: Shew_3117 - predicted chromosome partitioning protein (with smc-like Shew_3118) (from data), at 3,701,945 to 3,702,598 _3117 Shew_3118: Shew_3118 - smc-like chromosome partitioning protein (DUF3584) (from data), at 3,702,599 to 3,706,270 _3118 Shew_3119: Shew_3119 - hypothetical protein (RefSeq), at 3,706,698 to 3,707,411 _3119 Shew_3120: Shew_3120 - phosphate-selective porin O and P (RefSeq), at 3,707,988 to 3,709,160 _3120 Shew_3121: Shew_3121 - FMN-binding domain-containing protein (RefSeq), at 3,709,313 to 3,709,828 _3121 Shew_3122: Shew_3122 - PepSY-associated TM helix domain-containing protein (RefSeq), at 3,709,997 to 3,710,797 _3122 Shew_3123: Shew_3123 - penicillin-binding protein 1B (RefSeq), at 3,710,930 to 3,713,299 _3123
Locus Name Description Strand Phenotype
Shew_3113 Shew_3113 histidine kinase (RefSeq) + strong
Shew_3114 Shew_3114 two component, sigma54 specific, Fis family transcriptional regulator (RefSeq) + strong
Shew_3115 Shew_3115 sodium:dicarboxylate symporter (RefSeq) - insig.
Shew_3116 Shew_3116 predicted chromosome partitioning protein (with smc-like Shew_3118) (from data) - strong
Shew_3117 Shew_3117 predicted chromosome partitioning protein (with smc-like Shew_3118) (from data) - cofit
Shew_3118 Shew_3118 smc-like chromosome partitioning protein (DUF3584) (from data) - strong
Shew_3119 Shew_3119 hypothetical protein (RefSeq) - insig.
Shew_3120 Shew_3120 phosphate-selective porin O and P (RefSeq) + sig.
Shew_3121 Shew_3121 FMN-binding domain-containing protein (RefSeq) + insig.
Shew_3122 Shew_3122 PepSY-associated TM helix domain-containing protein (RefSeq) + insig.
Shew_3123 Shew_3123 penicillin-binding protein 1B (RefSeq) - strong

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