Gene info for Shew_2825 in Shewanella loihica PV-4

Annotation: tRNA pseudouridine synthase B (RefSeq)
Type 1: Protein-coding gene
Located on scaffold 113993, - strand, nucleotides 3,348,630 to 3,349,577
See nucleotide sequence around Shew_2825 or for all of scaffold 113993

Other databases: MicrobesOnline, NCBI, uniprot: A3QGU3

Nearby Genes

500 ntprfC and Shew_2821 are separated by 195 nucleotidesShew_2821 and Shew_2822 are separated by 137 nucleotidesShew_2822 and Shew_2823 are separated by 195 nucleotidesShew_2823 and rpsO are separated by 107 nucleotidesrpsO and Shew_2825 are separated by 95 nucleotidesShew_2825 and rbfA overlap by 1 nucleotidesrbfA and infB are separated by 124 nucleotidesinfB and nusA are separated by 26 nucleotidesnusA and Shew_2829 are separated by 27 nucleotidesShew_2829 and Shew_R0091 are separated by 129 nucleotides Shew_2820: prfC - peptide chain release factor 3 (RefSeq), at 3,341,022 to 3,342,602 prfC Shew_2821: Shew_2821 - lipoprotein NlpI (RefSeq), at 3,342,798 to 3,343,688 _2821 Shew_2822: Shew_2822 - polynucleotide phosphorylase/polyadenylase (RefSeq), at 3,343,826 to 3,345,928 _2822 Shew_2823: Shew_2823 - diguanylate cyclase/phosphodiesterase (RefSeq), at 3,346,124 to 3,348,157 _2823 Shew_2824: rpsO - 30S ribosomal protein S15 (RefSeq), at 3,348,265 to 3,348,534 rpsO Shew_2825: Shew_2825 - tRNA pseudouridine synthase B (RefSeq), at 3,348,630 to 3,349,577 _2825 Shew_2826: rbfA - ribosome-binding factor A (RefSeq), at 3,349,577 to 3,349,999 rbfA Shew_2827: infB - translation initiation factor IF-2 (RefSeq), at 3,350,124 to 3,352,781 infB Shew_2828: nusA - transcription elongation factor NusA (RefSeq), at 3,352,808 to 3,354,307 nusA Shew_2829: Shew_2829 - hypothetical protein (RefSeq), at 3,354,335 to 3,354,820 _2829 Shew_R0091: Shew_R0091 - tRNA-Met (RefSeq), at 3,354,950 to 3,355,026 _R0091
Locus Name Description Strand Phenotype
Shew_2820 prfC peptide chain release factor 3 (RefSeq) - strong
Shew_2821 Shew_2821 lipoprotein NlpI (RefSeq) - strong
Shew_2822 Shew_2822 polynucleotide phosphorylase/polyadenylase (RefSeq) - no data
Shew_2823 Shew_2823 diguanylate cyclase/phosphodiesterase (RefSeq) + insig.
Shew_2824 rpsO 30S ribosomal protein S15 (RefSeq) - no data
Shew_2825 Shew_2825 tRNA pseudouridine synthase B (RefSeq) - sig.
Shew_2826 rbfA ribosome-binding factor A (RefSeq) - no data
Shew_2827 infB translation initiation factor IF-2 (RefSeq) - no data
Shew_2828 nusA transcription elongation factor NusA (RefSeq) - no data
Shew_2829 Shew_2829 hypothetical protein (RefSeq) - no data
Shew_R0091 Shew_R0091 tRNA-Met (RefSeq) - no data

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