Gene info for Shew_1562 in Shewanella loihica PV-4

Annotation: pseudouridylate synthase (RefSeq)
Type 1: Protein-coding gene
Located on scaffold 113993, - strand, nucleotides 1,792,324 to 1,793,118
See nucleotide sequence around Shew_1562 or for all of scaffold 113993

Other databases: MicrobesOnline, NCBI, uniprot: A3QD81

Nearby Genes

500 ntShew_1557 and Shew_1558 are separated by 183 nucleotidesShew_1558 and Shew_1559 are separated by 32 nucleotidesShew_1559 and trmU are separated by 3 nucleotidestrmU and Shew_1561 are separated by 177 nucleotidesShew_1561 and Shew_1562 are separated by 11 nucleotidesShew_1562 and Shew_1563 are separated by 272 nucleotidesShew_1563 and Shew_1564 are separated by 125 nucleotidesShew_1564 and Shew_1565 are separated by 244 nucleotidesShew_1565 and Shew_1566 are separated by 35 nucleotidesShew_1566 and Shew_1567 are separated by 219 nucleotides Shew_1557: Shew_1557 - cupin 4 family protein (RefSeq), at 1,787,202 to 1,788,362 _1557 Shew_1558: Shew_1558 - adenylosuccinate lyase (RefSeq), at 1,788,546 to 1,789,916 _1558 Shew_1559: Shew_1559 - hypothetical protein (RefSeq), at 1,789,949 to 1,790,566 _1559 Shew_1560: trmU - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (RefSeq), at 1,790,570 to 1,791,685 trmU Shew_1561: Shew_1561 - NUDIX hydrolase (RefSeq), at 1,791,863 to 1,792,312 _1561 Shew_1562: Shew_1562 - pseudouridylate synthase (RefSeq), at 1,792,324 to 1,793,118 _1562 Shew_1563: Shew_1563 - isocitrate dehydrogenase, NADP-dependent (RefSeq), at 1,793,391 to 1,795,610 _1563 Shew_1564: Shew_1564 - cold-shock DNA-binding domain-containing protein (RefSeq), at 1,795,736 to 1,795,942 _1564 Shew_1565: Shew_1565 - ATP-dependent Clp protease adaptor protein ClpS (RefSeq), at 1,796,187 to 1,796,495 _1565 Shew_1566: Shew_1566 - ATP-dependent Clp protease, ATP-binding subunit clpA (RefSeq), at 1,796,531 to 1,798,789 _1566 Shew_1567: Shew_1567 - translation initiation factor IF-1 (RefSeq), at 1,799,009 to 1,799,227 _1567
Locus Name Description Strand Phenotype
Shew_1557 Shew_1557 cupin 4 family protein (RefSeq) - insig.
Shew_1558 Shew_1558 adenylosuccinate lyase (RefSeq) - no data
Shew_1559 Shew_1559 hypothetical protein (RefSeq) - strong
Shew_1560 trmU tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (RefSeq) - no data
Shew_1561 Shew_1561 NUDIX hydrolase (RefSeq) - insig.
Shew_1562 Shew_1562 pseudouridylate synthase (RefSeq) - insig.
Shew_1563 Shew_1563 isocitrate dehydrogenase, NADP-dependent (RefSeq) + strong
Shew_1564 Shew_1564 cold-shock DNA-binding domain-containing protein (RefSeq) - sig.
Shew_1565 Shew_1565 ATP-dependent Clp protease adaptor protein ClpS (RefSeq) + no data
Shew_1566 Shew_1566 ATP-dependent Clp protease, ATP-binding subunit clpA (RefSeq) + strong
Shew_1567 Shew_1567 translation initiation factor IF-1 (RefSeq) - no data

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