Gene info for Shew_1213 in Shewanella loihica PV-4

Annotation: RpoD family RNA polymerase sigma factor (RefSeq)
Type 1: Protein-coding gene
Located on scaffold 113993, + strand, nucleotides 1,406,809 to 1,407,783
See nucleotide sequence around Shew_1213 or for all of scaffold 113993

Other databases: MicrobesOnline, NCBI, uniprot: A3QC85

Nearby Genes

500 ntShew_1208 and Shew_1209 are separated by 9 nucleotidesShew_1209 and Shew_1210 overlap by 8 nucleotidesShew_1210 and Shew_1211 overlap by 19 nucleotidesShew_1211 and Shew_1212 are separated by 49 nucleotidesShew_1212 and Shew_1213 are separated by 77 nucleotidesShew_1213 and Shew_1214 are separated by 259 nucleotidesShew_1214 and recA are separated by 330 nucleotidesrecA and Shew_1216 are separated by 79 nucleotidesShew_1216 and Shew_1217 are separated by 244 nucleotidesShew_1217 and Shew_1218 are separated by 306 nucleotides Shew_1208: Shew_1208 - 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (RefSeq), at 1,402,813 to 1,403,298 _1208 Shew_1209: Shew_1209 - pseudouridylate synthase (RefSeq), at 1,403,308 to 1,404,375 _1209 Shew_1210: Shew_1210 - stationary-phase survival protein SurE (RefSeq), at 1,404,368 to 1,405,117 _1210 Shew_1211: Shew_1211 - protein-L-isoaspartate O-methyltransferase (RefSeq), at 1,405,099 to 1,405,749 _1211 Shew_1212: Shew_1212 - peptidase M23B (RefSeq), at 1,405,799 to 1,406,731 _1212 Shew_1213: Shew_1213 - RpoD family RNA polymerase sigma factor (RefSeq), at 1,406,809 to 1,407,783 _1213 Shew_1214: Shew_1214 - DNA mismatch repair protein (RefSeq), at 1,408,043 to 1,410,610 _1214 Shew_1215: recA - recombinase A (RefSeq), at 1,410,941 to 1,412,002 recA Shew_1216: Shew_1216 - regulatory protein RecX (RefSeq), at 1,412,082 to 1,412,534 _1216 Shew_1217: Shew_1217 - alanyl-tRNA synthetase (RefSeq), at 1,412,779 to 1,415,403 _1217 Shew_1218: Shew_1218 - carbon storage regulator, CsrA (RefSeq), at 1,415,710 to 1,415,907 _1218
Locus Name Description Strand Phenotype
Shew_1208 Shew_1208 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (RefSeq) + no data
Shew_1209 Shew_1209 pseudouridylate synthase (RefSeq) + sig.
Shew_1210 Shew_1210 stationary-phase survival protein SurE (RefSeq) + strong
Shew_1211 Shew_1211 protein-L-isoaspartate O-methyltransferase (RefSeq) + sig.
Shew_1212 Shew_1212 peptidase M23B (RefSeq) + insig.
Shew_1213 Shew_1213 RpoD family RNA polymerase sigma factor (RefSeq) + insig.
Shew_1214 Shew_1214 DNA mismatch repair protein (RefSeq) - sig.
Shew_1215 recA recombinase A (RefSeq) + sig.
Shew_1216 Shew_1216 regulatory protein RecX (RefSeq) + insig.
Shew_1217 Shew_1217 alanyl-tRNA synthetase (RefSeq) + no data
Shew_1218 Shew_1218 carbon storage regulator, CsrA (RefSeq) + no data

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