Gene info for Shew_1136 in Shewanella loihica PV-4

Updated annotation (from data): pyrroline-5-carboxylate reductase (EC 1.5.1.2)
Rationale: Important for fitness in most defined media. Semi-automated annotation based on the auxotrophic phenotype and a hit to HMM TIGR00112.
Original annotation: pyrroline-5-carboxylate reductase (RefSeq)
Type 1: Protein-coding gene
Located on scaffold 113993, - strand, nucleotides 1,310,633 to 1,311,451
See nucleotide sequence around Shew_1136 or for all of scaffold 113993

Other databases: MicrobesOnline, NCBI, uniprot: A3QC09

Nearby Genes

500 ntShew_1131 and Shew_1132 overlap by 1 nucleotidesShew_1132 and Shew_1133 are separated by 69 nucleotidesShew_1133 and Shew_1134 are separated by 86 nucleotidesShew_1134 and Shew_1135 are separated by 0 nucleotidesShew_1135 and Shew_1136 are separated by 60 nucleotidesShew_1136 and Shew_1137 are separated by 81 nucleotidesShew_1137 and Shew_1138 are separated by 35 nucleotidesShew_1138 and Shew_1139 are separated by 12 nucleotidesShew_1139 and Shew_1140 are separated by 126 nucleotidesShew_1140 and Shew_1141 are separated by 416 nucleotides Shew_1131: Shew_1131 - putative oxygen-independent coproporphyrinogen III oxidase (RefSeq), at 1,307,332 to 1,308,471 _1131 Shew_1132: Shew_1132 - RdgB/HAM1 family non-canonical purine NTP pyrophosphatase (RefSeq), at 1,308,471 to 1,309,142 _1132 Shew_1133: Shew_1133 - hypothetical protein (RefSeq), at 1,309,212 to 1,309,646 _1133 Shew_1134: Shew_1134 - hypothetical protein (RefSeq), at 1,309,733 to 1,310,023 _1134 Shew_1135: Shew_1135 - protein of unknown function YGGT (RefSeq), at 1,310,024 to 1,310,572 _1135 Shew_1136: Shew_1136 - pyrroline-5-carboxylate reductase (EC 1.5.1.2) (from data), at 1,310,633 to 1,311,451 _1136 Shew_1137: Shew_1137 - alanine racemase domain-containing protein (RefSeq), at 1,311,533 to 1,312,234 _1137 Shew_1138: Shew_1138 - twitching motility protein (RefSeq), at 1,312,270 to 1,313,307 _1138 Shew_1139: Shew_1139 - twitching motility protein (RefSeq), at 1,313,320 to 1,314,432 _1139 Shew_1140: Shew_1140 - ferrochelatase (RefSeq), at 1,314,559 to 1,315,626 _1140 Shew_1141: Shew_1141 - transposase IS116/IS110/IS902 family protein (RefSeq), at 1,316,043 to 1,317,056 _1141
Locus Name Description Strand Phenotype
Shew_1131 Shew_1131 putative oxygen-independent coproporphyrinogen III oxidase (RefSeq) - insig.
Shew_1132 Shew_1132 RdgB/HAM1 family non-canonical purine NTP pyrophosphatase (RefSeq) - no data
Shew_1133 Shew_1133 hypothetical protein (RefSeq) - sig.
Shew_1134 Shew_1134 hypothetical protein (RefSeq) - insig.
Shew_1135 Shew_1135 protein of unknown function YGGT (RefSeq) - no data
Shew_1136 Shew_1136 pyrroline-5-carboxylate reductase (EC 1.5.1.2) (from data) - strong
Shew_1137 Shew_1137 alanine racemase domain-containing protein (RefSeq) - insig.
Shew_1138 Shew_1138 twitching motility protein (RefSeq) + cofit
Shew_1139 Shew_1139 twitching motility protein (RefSeq) + cofit
Shew_1140 Shew_1140 ferrochelatase (RefSeq) + sig.
Shew_1141 Shew_1141 transposase IS116/IS110/IS902 family protein (RefSeq) - no data

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