Gene info for Shew_1054 in Shewanella loihica PV-4

Annotation: ribonuclease III (RefSeq)
Type 1: Protein-coding gene
Located on scaffold 113993, + strand, nucleotides 1,216,933 to 1,217,610
See nucleotide sequence around Shew_1054 or for all of scaffold 113993

Other databases: MicrobesOnline, NCBI, uniprot: A3QBS7

Nearby Genes

500 ntShew_1049 and Shew_1050 are separated by 65 nucleotidesShew_1050 and Shew_1051 are separated by 7 nucleotidesShew_1051 and Shew_1052 are separated by 108 nucleotidesShew_1052 and Shew_1053 are separated by 153 nucleotidesShew_1053 and Shew_1054 are separated by 0 nucleotidesShew_1054 and era overlap by 4 nucleotidesera and Shew_1056 are separated by 104 nucleotidesShew_1056 and Shew_1057 are separated by 128 nucleotidesShew_1057 and Shew_1058 are separated by 44 nucleotidesShew_1058 and Shew_1059 are separated by 266 nucleotides Shew_1049: Shew_1049 - anti sigma-E protein, RseA (RefSeq), at 1,211,878 to 1,212,480 _1049 Shew_1050: Shew_1050 - sigma E regulatory protein, MucB/RseB (RefSeq), at 1,212,546 to 1,213,478 _1050 Shew_1051: Shew_1051 - positive regulator of sigma E, RseC/MucC (RefSeq), at 1,213,486 to 1,213,962 _1051 Shew_1052: Shew_1052 - GTP-binding protein LepA (RefSeq), at 1,214,071 to 1,215,861 _1052 Shew_1053: Shew_1053 - signal peptidase I (RefSeq), at 1,216,015 to 1,216,932 _1053 Shew_1054: Shew_1054 - ribonuclease III (RefSeq), at 1,216,933 to 1,217,610 _1054 Shew_1055: era - GTP-binding protein Era (RefSeq), at 1,217,607 to 1,218,602 era Shew_1056: Shew_1056 - DNA repair protein RecO (RefSeq), at 1,218,707 to 1,219,402 _1056 Shew_1057: Shew_1057 - pyridoxal phosphate biosynthetic protein PdxJ (RefSeq), at 1,219,531 to 1,220,268 _1057 Shew_1058: Shew_1058 - holo-acyl-carrier-protein synthase (RefSeq), at 1,220,313 to 1,220,714 _1058 Shew_1059: Shew_1059 - hypothetical protein (RefSeq), at 1,220,981 to 1,221,523 _1059
Locus Name Description Strand Phenotype
Shew_1049 Shew_1049 anti sigma-E protein, RseA (RefSeq) + no data
Shew_1050 Shew_1050 sigma E regulatory protein, MucB/RseB (RefSeq) + strong
Shew_1051 Shew_1051 positive regulator of sigma E, RseC/MucC (RefSeq) + no data
Shew_1052 Shew_1052 GTP-binding protein LepA (RefSeq) + strong
Shew_1053 Shew_1053 signal peptidase I (RefSeq) + no data
Shew_1054 Shew_1054 ribonuclease III (RefSeq) + no data
Shew_1055 era GTP-binding protein Era (RefSeq) + no data
Shew_1056 Shew_1056 DNA repair protein RecO (RefSeq) + strong
Shew_1057 Shew_1057 pyridoxal phosphate biosynthetic protein PdxJ (RefSeq) + no data
Shew_1058 Shew_1058 holo-acyl-carrier-protein synthase (RefSeq) + strong
Shew_1059 Shew_1059 hypothetical protein (RefSeq) + insig.

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