Gene info for Shew_0553 in Shewanella loihica PV-4

Annotation: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (RefSeq)
Type 1: Protein-coding gene
Located on scaffold 113993, - strand, nucleotides 624,800 to 625,726
See nucleotide sequence around Shew_0553 or for all of scaffold 113993

Other databases: MicrobesOnline, NCBI, uniprot: A3QAC7

Nearby Genes

500 ntShew_0548 and Shew_0549 are separated by 48 nucleotidesShew_0549 and Shew_0550 are separated by 47 nucleotidesShew_0550 and Shew_0551 overlap by 4 nucleotidesShew_0551 and Shew_0552 are separated by 77 nucleotidesShew_0552 and Shew_0553 are separated by 341 nucleotidesShew_0553 and Shew_0554 are separated by 494 nucleotidesShew_0554 and Shew_0555 overlap by 1 nucleotidesShew_0555 and Shew_0556 are separated by 124 nucleotidesShew_0556 and Shew_0557 are separated by 8 nucleotidesShew_0557 and Shew_0558 are separated by 43 nucleotides Shew_0548: Shew_0548 - yqiA-like hydrolase, affects the cell envelope (from data), at 618,198 to 618,776 _0548 Shew_0549: Shew_0549 - DNA topoisomerase IV subunit B (RefSeq), at 618,825 to 620,711 _0549 Shew_0550: Shew_0550 - L-sorbosone dehydrogenase, putative (RefSeq), at 620,759 to 621,925 _0550 Shew_0551: Shew_0551 - DNA topoisomerase IV subunit A (RefSeq), at 621,922 to 624,189 _0551 Shew_0552: Shew_0552 - BFD/(2Fe-2S)-binding domain-containing protein (RefSeq), at 624,267 to 624,458 _0552 Shew_0553: Shew_0553 - D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (RefSeq), at 624,800 to 625,726 _0553 Shew_0554: Shew_0554 - glycerophosphoryl diester phosphodiesterase (RefSeq), at 626,221 to 626,928 _0554 Shew_0555: Shew_0555 - MscS mechanosensitive ion channel (RefSeq), at 626,928 to 630,110 _0555 Shew_0556: Shew_0556 - hypothetical protein (RefSeq), at 630,235 to 631,125 _0556 Shew_0557: Shew_0557 - phosphatidylserine decarboxylase (RefSeq), at 631,134 to 631,994 _0557 Shew_0558: Shew_0558 - ribosome-associated GTPase (RefSeq), at 632,038 to 633,051 _0558
Locus Name Description Strand Phenotype
Shew_0548 Shew_0548 yqiA-like hydrolase, affects the cell envelope (from data) + strong
Shew_0549 Shew_0549 DNA topoisomerase IV subunit B (RefSeq) + no data
Shew_0550 Shew_0550 L-sorbosone dehydrogenase, putative (RefSeq) + strong
Shew_0551 Shew_0551 DNA topoisomerase IV subunit A (RefSeq) + no data
Shew_0552 Shew_0552 BFD/(2Fe-2S)-binding domain-containing protein (RefSeq) - no data
Shew_0553 Shew_0553 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (RefSeq) - sig.
Shew_0554 Shew_0554 glycerophosphoryl diester phosphodiesterase (RefSeq) - insig.
Shew_0555 Shew_0555 MscS mechanosensitive ion channel (RefSeq) - strong
Shew_0556 Shew_0556 hypothetical protein (RefSeq) - insig.
Shew_0557 Shew_0557 phosphatidylserine decarboxylase (RefSeq) - no data
Shew_0558 Shew_0558 ribosome-associated GTPase (RefSeq) - no data

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