Gene info for Shew_0544 in Shewanella loihica PV-4

Name: tolC
Annotation: outer membrane channel protein (RefSeq)
Type 1: Protein-coding gene
Located on scaffold 113993, - strand, nucleotides 614,493 to 615,839
See nucleotide sequence around Shew_0544 or for all of scaffold 113993

Other databases: MicrobesOnline, NCBI, uniprot: A3QAB8

Nearby Genes

500 ntShew_0539 and Shew_0540 are separated by 15 nucleotidesShew_0540 and Shew_0541 are separated by 49 nucleotidesShew_0541 and Shew_0542 are separated by 12 nucleotidesShew_0542 and Shew_0543 are separated by 4 nucleotidesShew_0543 and tolC are separated by 67 nucleotidestolC and Shew_0545 are separated by 263 nucleotidesShew_0545 and Shew_0546 overlap by 4 nucleotidesShew_0546 and Shew_0547 are separated by 9 nucleotidesShew_0547 and Shew_0548 are separated by 194 nucleotidesShew_0548 and Shew_0549 are separated by 48 nucleotides Shew_0539: Shew_0539 - hypothetical protein (RefSeq), at 611,049 to 611,408 _0539 Shew_0540: Shew_0540 - enoyl-CoA hydratase/isomerase (RefSeq), at 611,424 to 612,161 _0540 Shew_0541: Shew_0541 - hypothetical protein (RefSeq), at 612,211 to 612,678 _0541 Shew_0542: Shew_0542 - hypothetical protein (RefSeq), at 612,691 to 613,662 _0542 Shew_0543: Shew_0543 - hypothetical protein (RefSeq), at 613,667 to 614,425 _0543 Shew_0544: tolC - outer membrane channel protein (RefSeq), at 614,493 to 615,839 tolC Shew_0545: Shew_0545 - ADP-ribose diphosphatase (RefSeq), at 616,103 to 616,711 _0545 Shew_0546: Shew_0546 - hypothetical protein (RefSeq), at 616,708 to 617,154 _0546 Shew_0547: Shew_0547 - calcineurin phosphoesterase C-terminal domain-containing protein (RefSeq), at 617,164 to 618,003 _0547 Shew_0548: Shew_0548 - yqiA-like hydrolase, affects the cell envelope (from data), at 618,198 to 618,776 _0548 Shew_0549: Shew_0549 - DNA topoisomerase IV subunit B (RefSeq), at 618,825 to 620,711 _0549
Locus Name Description Strand Phenotype
Shew_0539 Shew_0539 hypothetical protein (RefSeq) + no data
Shew_0540 Shew_0540 enoyl-CoA hydratase/isomerase (RefSeq) - insig.
Shew_0541 Shew_0541 hypothetical protein (RefSeq) + insig.
Shew_0542 Shew_0542 hypothetical protein (RefSeq) + sig.
Shew_0543 Shew_0543 hypothetical protein (RefSeq) + strong
Shew_0544 tolC outer membrane channel protein (RefSeq) - strong
Shew_0545 Shew_0545 ADP-ribose diphosphatase (RefSeq) + insig.
Shew_0546 Shew_0546 hypothetical protein (RefSeq) + insig.
Shew_0547 Shew_0547 calcineurin phosphoesterase C-terminal domain-containing protein (RefSeq) + no data
Shew_0548 Shew_0548 yqiA-like hydrolase, affects the cell envelope (from data) + strong
Shew_0549 Shew_0549 DNA topoisomerase IV subunit B (RefSeq) + no data

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