Gene info for Shew_R0013 in Shewanella loihica PV-4

Name: rnpB
Annotation: RNA component of RNaseP (NCBI)
Type 6: Other non-coding RNA
Located on scaffold 113993, + strand, nucleotides 242,495 to 242,800
See nucleotide sequence around Shew_R0013 or for all of scaffold 113993

Other databases: MicrobesOnline

Nearby Genes

500 ntShew_0224 and Shew_0225 overlap by 4 nucleotidesShew_0225 and Shew_0226 are separated by 68 nucleotidesShew_0226 and Shew_0227 overlap by 4 nucleotidesShew_0227 and Shew_0228 are separated by 88 nucleotidesShew_0228 and rnpB are separated by 109 nucleotidesrnpB and Shew_0229 are separated by 96 nucleotidesShew_0229 and Shew_0230 are separated by 69 nucleotidesShew_0230 and Shew_0231 are separated by 183 nucleotidesShew_0231 and Shew_0232 are separated by 192 nucleotidesShew_0232 and Shew_0233 are separated by 130 nucleotides Shew_0224: Shew_0224 - transport-associated (RefSeq), at 237,981 to 238,550 _0224 Shew_0225: Shew_0225 - phosphoheptose isomerase (RefSeq), at 238,547 to 239,140 _0225 Shew_0226: Shew_0226 - hypothetical protein (RefSeq), at 239,209 to 239,553 _0226 Shew_0227: Shew_0227 - LppC family lipoprotein (RefSeq), at 239,550 to 241,454 _0227 Shew_0228: Shew_0228 - uroporphyrin-III C/tetrapyrrole methyltransferase (RefSeq), at 241,543 to 242,385 _0228 Shew_R0013: rnpB - RNA component of RNaseP (NCBI), at 242,495 to 242,800 rnpB Shew_0229: Shew_0229 - extracellular solute-binding protein (RefSeq), at 242,897 to 243,706 _0229 Shew_0230: Shew_0230 - hypothetical protein (RefSeq), at 243,776 to 245,485 _0230 Shew_0231: Shew_0231 - hypothetical protein (RefSeq), at 245,669 to 246,940 _0231 Shew_0232: Shew_0232 - hypothetical protein (RefSeq), at 247,133 to 247,528 _0232 Shew_0233: Shew_0233 - hypothetical protein (RefSeq), at 247,659 to 250,001 _0233
Locus Name Description Strand Phenotype
Shew_0224 Shew_0224 transport-associated (RefSeq) - strong
Shew_0225 Shew_0225 phosphoheptose isomerase (RefSeq) - sig.
Shew_0226 Shew_0226 hypothetical protein (RefSeq) - insig.
Shew_0227 Shew_0227 LppC family lipoprotein (RefSeq) - no data
Shew_0228 Shew_0228 uroporphyrin-III C/tetrapyrrole methyltransferase (RefSeq) + strong
Shew_R0013 rnpB RNA component of RNaseP (NCBI) + no data
Shew_0229 Shew_0229 extracellular solute-binding protein (RefSeq) - insig.
Shew_0230 Shew_0230 hypothetical protein (RefSeq) - insig.
Shew_0231 Shew_0231 hypothetical protein (RefSeq) - sig.
Shew_0232 Shew_0232 hypothetical protein (RefSeq) + insig.
Shew_0233 Shew_0233 hypothetical protein (RefSeq) + insig.

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