Gene info for DvrnpB1 in Desulfovibrio vulgaris Hildenborough JW710

Name: rnpB
Annotation: RnpB RNA: catalytic subunit of RNase P (VIMSS-AUTO)
Type 6: Other non-coding RNA
Located on scaffold 1944, - strand, nucleotides 1,533,841 to 1,534,196
See nucleotide sequence around DvrnpB1 or for all of scaffold 1944

Other databases: MicrobesOnline

Nearby Genes

500 ntDVU1450 and DVU1451 overlap by 1 nucleotidesDVU1451 and dtd overlap by 38 nucleotidesdtd and fadD are separated by 4 nucleotidesfadD and ispD are separated by 157 nucleotidesispD and rnpB are separated by 46 nucleotidesrnpB and DVU1455 are separated by 12 nucleotidesDVU1455 and DVU1456 are separated by 40 nucleotidesDVU1456 and tRNA-Met are separated by 119 nucleotidestRNA-Met and trxB are separated by 48 nucleotidestrxB and DVU1458 are separated by 300 nucleotides DVU1450: DVU1450 - anti-sigma factor, putative (TIGR), at 1,528,690 to 1,529,130 DVU1450 DVU1451: DVU1451 - response regulator (TIGR), at 1,529,130 to 1,530,299 DVU1451 DVU1452: dtd - D-tyrosyl-tRNA(Tyr) deacylase (TIGR), at 1,530,262 to 1,530,750 dtd DVU1453: fadD - long-chain-fatty-acid--CoA ligase (TIGR), at 1,530,755 to 1,532,449 fadD DVU1454: ispD - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (TIGR), at 1,532,607 to 1,533,794 ispD DvrnpB1: rnpB - RnpB RNA: catalytic subunit of RNase P (VIMSS-AUTO), at 1,533,841 to 1,534,196 rnpB DVU1455: DVU1455 - conserved hypothetical protein (TIGR), at 1,534,209 to 1,534,952 DVU1455 DVU1456: DVU1456 - NIF3 family protein (TIGR), at 1,534,993 to 1,536,003 DVU1456 DVU_tRNA-Met-2: tRNA-Met - tRNA with anticodon CAT for Met (VIMSS-AUTO), at 1,536,123 to 1,536,198 tRNA-Met DVU1457: trxB - thioredoxin reductase, putative (TIGR), at 1,536,247 to 1,537,176 trxB DVU1458: DVU1458 - chemotaxis protein CheZ, putative (TIGR), at 1,537,477 to 1,538,223 DVU1458
Locus Name Description Strand Phenotype
DVU1450 DVU1450 anti-sigma factor, putative (TIGR) - sig.
DVU1451 DVU1451 response regulator (TIGR) - insig.
DVU1452 dtd D-tyrosyl-tRNA(Tyr) deacylase (TIGR) - insig.
DVU1453 fadD long-chain-fatty-acid--CoA ligase (TIGR) - insig.
DVU1454 ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (TIGR) - no data
DvrnpB1 rnpB RnpB RNA: catalytic subunit of RNase P (VIMSS-AUTO) - no data
DVU1455 DVU1455 conserved hypothetical protein (TIGR) - strong
DVU1456 DVU1456 NIF3 family protein (TIGR) - sig.
DVU_tRNA-Met-2 tRNA-Met tRNA with anticodon CAT for Met (VIMSS-AUTO) - no data
DVU1457 trxB thioredoxin reductase, putative (TIGR) - strong
DVU1458 DVU1458 chemotaxis protein CheZ, putative (TIGR) - insig.

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