Gene info for DvtmRNA1 in Desulfovibrio vulgaris Hildenborough JW710

Name: ssrA
Annotation: tmRNA (transfer messenger RNA, or 10Sa RNA) (VIMSS-AUTO)
Type 6: Other non-coding RNA
Located on scaffold 1944, + strand, nucleotides 1,922,270 to 1,922,621
See nucleotide sequence around DvtmRNA1 or for all of scaffold 1944

Other databases: MicrobesOnline

Nearby Genes

500 ntDVU1850 and DVU1851 are separated by 80 nucleotidesDVU1851 and DVU1852 are separated by 154 nucleotidesDVU1852 and DVU1853 are separated by 181 nucleotidesDVU1853 and DVU1854 are separated by 76 nucleotidesDVU1854 and ssrA are separated by 128 nucleotidesssrA and DVU1855 are separated by 174 nucleotidesDVU1855 and DVU1857 are separated by 358 nucleotidesDVU1857 and DVU1858 are separated by 254 nucleotidesDVU1858 and DVU1859 are separated by 355 nucleotidesDVU1859 and cutE overlap by 16 nucleotides DVU1850: DVU1850 - CBS domain protein (TIGR), at 1,918,297 to 1,918,725 DVU1850 DVU1851: DVU1851 - peptidase, M23/M37 family (TIGR), at 1,918,806 to 1,920,128 DVU1851 DVU1852: DVU1852 - conserved hypothetical protein (TIGR), at 1,920,283 to 1,920,894 DVU1852 DVU1853: DVU1853 - hypothetical protein (TIGR), at 1,921,076 to 1,921,372 DVU1853 DVU1854: DVU1854 - hypothetical protein (TIGR), at 1,921,449 to 1,922,141 DVU1854 DvtmRNA1: ssrA - tmRNA (transfer messenger RNA, or 10Sa RNA) (VIMSS-AUTO), at 1,922,270 to 1,922,621 ssrA DVU1855: DVU1855 - integrase, truncation (TIGR), at 1,922,796 to 1,923,116 DVU1855 DVU1857: DVU1857 - methyl-accepting chemotaxis protein (TIGR), at 1,923,475 to 1,925,562 DVU1857 DVU1858: DVU1858 - cold shock domain protein (TIGR), at 1,925,817 to 1,926,353 DVU1858 DVU1859: DVU1859 - hypothetical protein (TIGR), at 1,926,709 to 1,926,834 DVU1859 DVU1860: cutE - apolipoprotein N-acyltransferase (TIGR), at 1,926,819 to 1,928,327 cutE
Locus Name Description Strand Phenotype
DVU1850 DVU1850 CBS domain protein (TIGR) + insig.
DVU1851 DVU1851 peptidase, M23/M37 family (TIGR) + insig.
DVU1852 DVU1852 conserved hypothetical protein (TIGR) + insig.
DVU1853 DVU1853 hypothetical protein (TIGR) - insig.
DVU1854 DVU1854 hypothetical protein (TIGR) + insig.
DvtmRNA1 ssrA tmRNA (transfer messenger RNA, or 10Sa RNA) (VIMSS-AUTO) + no data
DVU1855 DVU1855 integrase, truncation (TIGR) + insig.
DVU1857 DVU1857 methyl-accepting chemotaxis protein (TIGR) - insig.
DVU1858 DVU1858 cold shock domain protein (TIGR) - insig.
DVU1859 DVU1859 hypothetical protein (TIGR) + insig.
DVU1860 cutE apolipoprotein N-acyltransferase (TIGR) + no data

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