Gene info for Dv5SE in Desulfovibrio vulgaris Hildenborough JW710

Name: rrf
Annotation: 5S ribosomal RNA (VIMSS-AUTO)
Type 4: 5S ribosomal RNA
Located on scaffold 1944, - strand, nucleotides 3,247,063 to 3,247,179
See nucleotide sequence around Dv5SE or for all of scaffold 1944

Other databases: MicrobesOnline

Nearby Genes

500 nttolR and DVU3101 are separated by 9 nucleotidesDVU3101 and DVU3102 are separated by 105 nucleotidesDVU3102 and DVU3103 are separated by 76 nucleotidesDVU3103 and pal are separated by 199 nucleotidespal and rrf are separated by 2264 nucleotidesrrf and rrl are separated by 107 nucleotidesrrl and tRNA-Ala are separated by 152 nucleotidestRNA-Ala and tRNA-Ile are separated by 22 nucleotidestRNA-Ile and rrsE are separated by 73 nucleotidesrrsE and DVU3106 are separated by 511 nucleotides DVU3100: tolR - biopolymer transport protein, ExbD/TolR family (TIGR), at 3,240,501 to 3,240,920 tolR DVU3101: DVU3101 - tonB protein, putative (TIGR), at 3,240,930 to 3,241,955 DVU3101 DVU3102: DVU3102 - hypothetical protein (TIGR), at 3,242,061 to 3,242,648 DVU3102 DVU3103: DVU3103 - tolB protein, putative (TIGR), at 3,242,725 to 3,244,095 DVU3103 DVU3104: pal - peptidoglycan-associated lipoprotein, putative (TIGR), at 3,244,295 to 3,244,798 pal Dv5SE: rrf - 5S ribosomal RNA (VIMSS-AUTO), at 3,247,063 to 3,247,179 rrf Dv23SE: rrl - 23S ribosomal RNA (VIMSS-AUTO), at 3,247,287 to 3,250,207 rrl DVU_tRNA-Ala-8: tRNA-Ala - tRNA with anticodon TGC for Ala (VIMSS-AUTO), at 3,250,360 to 3,250,435 tRNA-Ala DVU_tRNA-Ile-5: tRNA-Ile - tRNA with anticodon GAT for Ile (VIMSS-AUTO), at 3,250,458 to 3,250,534 tRNA-Ile Dv16SE: rrsE - 16S ribosomal RNA (RefSeq), at 3,250,608 to 3,252,148 rrsE DVU3106: DVU3106 - GGDEF domain protein (TIGR), at 3,252,660 to 3,254,552 DVU3106
Locus Name Description Strand Phenotype
DVU3100 tolR biopolymer transport protein, ExbD/TolR family (TIGR) + no data
DVU3101 DVU3101 tonB protein, putative (TIGR) + no data
DVU3102 DVU3102 hypothetical protein (TIGR) + insig.
DVU3103 DVU3103 tolB protein, putative (TIGR) + no data
DVU3104 pal peptidoglycan-associated lipoprotein, putative (TIGR) + no data
Dv5SE rrf 5S ribosomal RNA (VIMSS-AUTO) - no data
Dv23SE rrl 23S ribosomal RNA (VIMSS-AUTO) - no data
DVU_tRNA-Ala-8 tRNA-Ala tRNA with anticodon TGC for Ala (VIMSS-AUTO) - no data
DVU_tRNA-Ile-5 tRNA-Ile tRNA with anticodon GAT for Ile (VIMSS-AUTO) - no data
Dv16SE rrsE 16S ribosomal RNA (RefSeq) - no data
DVU3106 DVU3106 GGDEF domain protein (TIGR) - sig.

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