Gene info for Dv5SA in Desulfovibrio vulgaris Hildenborough JW710

Name: rrf
Annotation: 5S ribosomal RNA (VIMSS-AUTO)
Type 4: 5S ribosomal RNA
Located on scaffold 1944, + strand, nucleotides 110,870 to 110,986
See nucleotide sequence around Dv5SA or for all of scaffold 1944

Other databases: MicrobesOnline

Nearby Genes

500 nttrpB-1 and rrsA are separated by 491 nucleotidesrrsA and tRNA-Ile are separated by 73 nucleotidestRNA-Ile and tRNA-Ala are separated by 22 nucleotidestRNA-Ala and rrl are separated by 152 nucleotidesrrl and rrf are separated by 107 nucleotidesrrf and DVU0087 are separated by 915 nucleotidesDVU0087 and DVU0088 overlap by 4 nucleotidesDVU0088 and DVU0089 are separated by 55 nucleotidesDVU0089 and wcaG are separated by 576 nucleotideswcaG and DVU0091 are separated by 52 nucleotides DVU0085: trpB-1 - tryptophan synthase, beta subunit (TIGR), at 104,165 to 105,409 trpB-1 Dv16SA: rrsA - 16S ribosomal RNA (RefSeq), at 105,901 to 107,441 rrsA DVU_tRNA-Ile-1: tRNA-Ile - tRNA with anticodon GAT for Ile (VIMSS-AUTO), at 107,515 to 107,591 tRNA-Ile DVU_tRNA-Ala-3: tRNA-Ala - tRNA with anticodon TGC for Ala (VIMSS-AUTO), at 107,614 to 107,689 tRNA-Ala Dv23SA: rrl - 23S ribosomal RNA (VIMSS-AUTO), at 107,842 to 110,762 rrl Dv5SA: rrf - 5S ribosomal RNA (VIMSS-AUTO), at 110,870 to 110,986 rrf DVU0087: DVU0087 - conserved domain protein (TIGR), at 111,902 to 112,396 DVU0087 DVU0088: DVU0088 - Sodium/pantothenate symporter (TIGR), at 112,393 to 113,880 DVU0088 DVU0089: DVU0089 - conserved hypothetical protein (TIGR), at 113,936 to 114,739 DVU0089 DVU0090: wcaG - GDP-fucose synthetase (TIGR), at 115,316 to 116,287 wcaG DVU0091: DVU0091 - conserved hypothetical protein (TIGR), at 116,340 to 117,062 DVU0091
Locus Name Description Strand Phenotype
DVU0085 trpB-1 tryptophan synthase, beta subunit (TIGR) + insig.
Dv16SA rrsA 16S ribosomal RNA (RefSeq) + no data
DVU_tRNA-Ile-1 tRNA-Ile tRNA with anticodon GAT for Ile (VIMSS-AUTO) + no data
DVU_tRNA-Ala-3 tRNA-Ala tRNA with anticodon TGC for Ala (VIMSS-AUTO) + no data
Dv23SA rrl 23S ribosomal RNA (VIMSS-AUTO) + no data
Dv5SA rrf 5S ribosomal RNA (VIMSS-AUTO) + no data
DVU0087 DVU0087 conserved domain protein (TIGR) + sig.
DVU0088 DVU0088 Sodium/pantothenate symporter (TIGR) + strong
DVU0089 DVU0089 conserved hypothetical protein (TIGR) - insig.
DVU0090 wcaG GDP-fucose synthetase (TIGR) + no data
DVU0091 DVU0091 conserved hypothetical protein (TIGR) + sig.

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