Gene info for SO_r008 in Shewanella oneidensis MR-1

Name: Sp23SA
Annotation: 23S ribosomal RNA (RefSeq)
Type 2: 23S (large subunit) ribosomal RNA
Located on scaffold 139, + strand, nucleotides 271,658 to 274,551
See nucleotide sequence around SO_r008 or for all of scaffold 139

Other databases: MicrobesOnline

Nearby Genes

500 ntccmF-1 and dsbE are separated by 11 nucleotidesdsbE and ccmH overlap by 4 nucleotidesccmH and SO0269 overlap by 4 nucleotidesSO0269 and Sp16SA are separated by 540 nucleotidesSp16SA and Sp23SA are separated by 315 nucleotidesSp23SA and Sp5SA are separated by 203 nucleotidesSp5SA and cinA are separated by 389 nucleotidescinA and SO0273 are separated by 96 nucleotidesSO0273 and ppc overlap by 1 nucleotidesppc and argC are separated by 698 nucleotides SO0266: ccmF-1 - cytochrome c-type biogenesis protein CcmF (NCBI ptt file), at 265,671 to 267,650 ccmF-1 SO0267: dsbE - thiol:disulfide interchange protein DsbE (NCBI ptt file), at 267,662 to 268,216 dsbE SO0268: ccmH - cytochrome c-type biogenesis protein CcmH (NCBI ptt file), at 268,213 to 268,692 ccmH SO0269: SO0269 - thioredoxin, putative (NCBI ptt file), at 268,689 to 269,273 SO0269 SO_r007: Sp16SA - 16S ribosomal RNA (RefSeq), at 269,814 to 271,342 Sp16SA SO_r008: Sp23SA - 23S ribosomal RNA (RefSeq), at 271,658 to 274,551 Sp23SA SO_r009: Sp5SA - 5S ribosomal RNA (RefSeq), at 274,755 to 274,874 Sp5SA SO0272: cinA - competence/damage-inducible protein CinA (NCBI ptt file), at 275,264 to 276,538 cinA SO0273: SO0273 - conserved hypothetical protein (NCBI ptt file), at 276,635 to 277,180 SO0273 SO0274: ppc - phosphoenolpyruvate carboxylase (NCBI ptt file), at 277,180 to 279,825 ppc SO0275: argC - N-acetyl-gamma-glutamyl-phosphate reductase (NCBI ptt file), at 280,524 to 281,504 argC
Locus Name Description Strand Phenotype
SO0266 ccmF-1 cytochrome c-type biogenesis protein CcmF (NCBI ptt file) + strong
SO0267 dsbE thiol:disulfide interchange protein DsbE (NCBI ptt file) + strong
SO0268 ccmH cytochrome c-type biogenesis protein CcmH (NCBI ptt file) + strong
SO0269 SO0269 thioredoxin, putative (NCBI ptt file) + insig.
SO_r007 Sp16SA 16S ribosomal RNA (RefSeq) + no data
SO_r008 Sp23SA 23S ribosomal RNA (RefSeq) + no data
SO_r009 Sp5SA 5S ribosomal RNA (RefSeq) + no data
SO0272 cinA competence/damage-inducible protein CinA (NCBI ptt file) + strong
SO0273 SO0273 conserved hypothetical protein (NCBI ptt file) - insig.
SO0274 ppc phosphoenolpyruvate carboxylase (NCBI ptt file) - strong
SO0275 argC N-acetyl-gamma-glutamyl-phosphate reductase (NCBI ptt file) + strong

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