Gene info for SO_t053 in Shewanella oneidensis MR-1

Name: tRNA-Asp-4
Annotation: tRNA-Asp (RefSeq)
Type 5: Transfer RNA
Located on scaffold 139, - strand, nucleotides 2,687,482 to 2,687,558
See nucleotide sequence around SO_t053 or for all of scaffold 139

Other databases: MicrobesOnline

Nearby Genes

500 ntSO2552 and SO2553 are separated by 92 nucleotidesSO2553 and SO2554 are separated by 179 nucleotidesSO2554 and SO2555 are separated by 103 nucleotidesSO2555 and SO2555.1 are separated by 216 nucleotidesSO2555.1 and tRNA-Asp-4 are separated by 285 nucleotidestRNA-Asp-4 and tRNA-Asp-3 are separated by 57 nucleotidestRNA-Asp-3 and SO2557 are separated by 167 nucleotidesSO2557 and dnaQ-2 are separated by 76 nucleotidesdnaQ-2 and rnhA are separated by 70 nucleotidesrnhA and SO2561 are separated by 28 nucleotides SO2552: SO2552 - conserved hypothetical protein (NCBI ptt file), at 2,684,537 to 2,684,914 SO2552 SO2553: SO2553 - conserved hypothetical protein (NCBI ptt file), at 2,685,007 to 2,685,843 SO2553 SO2554: SO2554 - conserved hypothetical protein (NCBI ptt file), at 2,686,023 to 2,686,379 SO2554 SO2555: SO2555 - hypothetical protein (NCBI ptt file), at 2,686,483 to 2,686,830 SO2555 SO2555.1: SO2555.1 - outer membrane protein OmpA weak homolog (NCBI ptt file), at 2,687,047 to 2,687,196 SO2555.1 SO_t053: tRNA-Asp-4 - tRNA-Asp (RefSeq), at 2,687,482 to 2,687,558 tRNA-Asp-4 SO_t054: tRNA-Asp-3 - tRNA-Asp (RefSeq), at 2,687,616 to 2,687,692 tRNA-Asp-3 SO2557: SO2557 - conserved hypothetical protein (NCBI ptt file), at 2,687,860 to 2,689,299 SO2557 SO2559: dnaQ-2 - DNA polymerase III, epsilon subunit (NCBI ptt file), at 2,689,376 to 2,690,104 dnaQ-2 SO2560: rnhA - ribonuclease HI (NCBI ptt file), at 2,690,175 to 2,690,651 rnhA SO2561: SO2561 - transcriptional regulator, LysR family (NCBI ptt file), at 2,690,680 to 2,691,579 SO2561
Locus Name Description Strand Phenotype
SO2552 SO2552 conserved hypothetical protein (NCBI ptt file) + insig.
SO2553 SO2553 conserved hypothetical protein (NCBI ptt file) + insig.
SO2554 SO2554 conserved hypothetical protein (NCBI ptt file) + insig.
SO2555 SO2555 hypothetical protein (NCBI ptt file) + insig.
SO2555.1 SO2555.1 outer membrane protein OmpA weak homolog (NCBI ptt file) + no data
SO_t053 tRNA-Asp-4 tRNA-Asp (RefSeq) - no data
SO_t054 tRNA-Asp-3 tRNA-Asp (RefSeq) - no data
SO2557 SO2557 conserved hypothetical protein (NCBI ptt file) - strong
SO2559 dnaQ-2 DNA polymerase III, epsilon subunit (NCBI ptt file) - no data
SO2560 rnhA ribonuclease HI (NCBI ptt file) + no data
SO2561 SO2561 transcriptional regulator, LysR family (NCBI ptt file) - insig.

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