Gene info for SO_t042 in Shewanella oneidensis MR-1

Name: tRNA-Cys-2
Annotation: tRNA-Cys (RefSeq)
Type 5: Transfer RNA
Located on scaffold 139, + strand, nucleotides 2,456,939 to 2,457,012
See nucleotide sequence around SO_t042 or for all of scaffold 139

Other databases: MicrobesOnline

Nearby Genes

500 ntSO2344 and gapA-2 are separated by 85 nucleotidesgapA-2 and SO2346 are separated by 224 nucleotidesSO2346 and gapA-3 are separated by 205 nucleotidesgapA-3 and tRNA-Gly-7 are separated by 296 nucleotidestRNA-Gly-7 and tRNA-Cys-2 are separated by 20 nucleotidestRNA-Cys-2 and tRNA-Leu-6 are separated by 49 nucleotidestRNA-Leu-6 and SO2349 are separated by 23 nucleotidesSO2349 and aspC-1 are separated by 158 nucleotidesaspC-1 and SO2351 are separated by 96 nucleotidesSO2351 and SO2352 are separated by 334 nucleotides SO2344: SO2344 - ISSod4, transposase (NCBI ptt file), at 2,451,506 to 2,452,708 SO2344 SO2345: gapA-2 - glyceraldehyde 3-phosphate dehydrogenase (NCBI ptt file), at 2,452,794 to 2,453,804 gapA-2 SO2346: SO2346 - conserved hypothetical protein (NCBI ptt file), at 2,454,029 to 2,454,907 SO2346 SO2347: gapA-3 - glyceraldehyde 3-phosphate dehydrogenase (NCBI ptt file), at 2,455,113 to 2,456,546 gapA-3 SO_t041: tRNA-Gly-7 - tRNA-Gly (RefSeq), at 2,456,843 to 2,456,918 tRNA-Gly-7 SO_t042: tRNA-Cys-2 - tRNA-Cys (RefSeq), at 2,456,939 to 2,457,012 tRNA-Cys-2 SO_t043: tRNA-Leu-6 - tRNA-Leu (RefSeq), at 2,457,062 to 2,457,148 tRNA-Leu-6 SO2349: SO2349 - hypothetical protein (NCBI ptt file), at 2,457,172 to 2,457,270 SO2349 SO2350: aspC-1 - aspartate aminotransferase (NCBI ptt file), at 2,457,429 to 2,458,622 aspC-1 SO2351: SO2351 - conserved hypothetical protein (NCBI ptt file), at 2,458,719 to 2,459,639 SO2351 SO2352: SO2352 - bax protein, putative (NCBI ptt file), at 2,459,974 to 2,460,741 SO2352
Locus Name Description Strand Phenotype
SO2344 SO2344 ISSod4, transposase (NCBI ptt file) + no data
SO2345 gapA-2 glyceraldehyde 3-phosphate dehydrogenase (NCBI ptt file) - no data
SO2346 SO2346 conserved hypothetical protein (NCBI ptt file) - sig.
SO2347 gapA-3 glyceraldehyde 3-phosphate dehydrogenase (NCBI ptt file) + strong
SO_t041 tRNA-Gly-7 tRNA-Gly (RefSeq) + no data
SO_t042 tRNA-Cys-2 tRNA-Cys (RefSeq) + no data
SO_t043 tRNA-Leu-6 tRNA-Leu (RefSeq) + no data
SO2349 SO2349 hypothetical protein (NCBI ptt file) - no data
SO2350 aspC-1 aspartate aminotransferase (NCBI ptt file) + strong
SO2351 SO2351 conserved hypothetical protein (NCBI ptt file) - strong
SO2352 SO2352 bax protein, putative (NCBI ptt file) + insig.

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