Gene info for SO_t006 in Shewanella oneidensis MR-1

Name: tRNA-Tyr-1
Annotation: tRNA-Tyr (RefSeq)
Type 5: Transfer RNA
Located on scaffold 139, + strand, nucleotides 226,887 to 226,971
See nucleotide sequence around SO_t006 or for all of scaffold 139

Other databases: MicrobesOnline

Nearby Genes

500 ntmurB and birA overlap by 8 nucleotidesbirA and panK are separated by 2 nucleotidespanK and SO0216 are separated by 112 nucleotidesSO0216 and tRNA-Thr-2 overlap by 10 nucleotidestRNA-Thr-2 and tRNA-Tyr-1 are separated by 7 nucleotidestRNA-Tyr-1 and tRNA-Gly-6 are separated by 34 nucleotidestRNA-Gly-6 and tRNA-Thr-1 are separated by 9 nucleotidestRNA-Thr-1 and tufB are separated by 115 nucleotidestufB and secE are separated by 276 nucleotidessecE and nusG are separated by 9 nucleotides SO0213: murB - UDP-N-acetylenolpyruvoylglucosamine reductase (NCBI ptt file), at 223,639 to 224,664 murB SO0214: birA - birA bifunctional protein (NCBI ptt file), at 224,657 to 225,616 birA SO0215: panK - pantothenate kinase (NCBI ptt file), at 225,619 to 226,569 panK SO0216: SO0216 - hypothetical protein (NCBI ptt file), at 226,682 to 226,813 SO0216 SO_t005: tRNA-Thr-2 - tRNA-Thr (RefSeq), at 226,804 to 226,879 tRNA-Thr-2 SO_t006: tRNA-Tyr-1 - tRNA-Tyr (RefSeq), at 226,887 to 226,971 tRNA-Tyr-1 SO_t007: tRNA-Gly-6 - tRNA-Gly (RefSeq), at 227,006 to 227,079 tRNA-Gly-6 SO_t008: tRNA-Thr-1 - tRNA-Thr (RefSeq), at 227,089 to 227,164 tRNA-Thr-1 SO0217: tufB - translation elongation factor Tu (NCBI ptt file), at 227,280 to 228,464 tufB SO0218: secE - preprotein translocase, SecE subunit (NCBI ptt file), at 228,741 to 229,112 secE SO0219: nusG - transcription antitermination protein NusG (NCBI ptt file), at 229,122 to 229,673 nusG
Locus Name Description Strand Phenotype
SO0213 murB UDP-N-acetylenolpyruvoylglucosamine reductase (NCBI ptt file) + no data
SO0214 birA birA bifunctional protein (NCBI ptt file) + no data
SO0215 panK pantothenate kinase (NCBI ptt file) - no data
SO0216 SO0216 hypothetical protein (NCBI ptt file) + insig.
SO_t005 tRNA-Thr-2 tRNA-Thr (RefSeq) + no data
SO_t006 tRNA-Tyr-1 tRNA-Tyr (RefSeq) + no data
SO_t007 tRNA-Gly-6 tRNA-Gly (RefSeq) + no data
SO_t008 tRNA-Thr-1 tRNA-Thr (RefSeq) + strong
SO0217 tufB translation elongation factor Tu (NCBI ptt file) + strong
SO0218 secE preprotein translocase, SecE subunit (NCBI ptt file) + no data
SO0219 nusG transcription antitermination protein NusG (NCBI ptt file) + no data

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