Gene info for SO3417.1 in Shewanella oneidensis MR-1

Annotation: peptidyl-prolyl cis-trans isomerase SlyD (NCBI ptt file)
Type 1: Protein-coding gene
Located on scaffold 139, + strand, nucleotides 3,558,774 to 3,559,004
See nucleotide sequence around SO3417.1 or for all of scaffold 139

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 ntSO3412 and thrC are separated by 610 nucleotidesthrC and thrB are separated by 72 nucleotidesthrB and thrA overlap by 4 nucleotidesthrA and slyD are separated by 641 nucleotidesslyD and SO3417.1 overlap by 212 nucleotidesSO3417.1 and SO3418 are separated by 173 nucleotidesSO3418 and trpR are separated by 32 nucleotidestrpR and SO3420 are separated by 189 nucleotidesSO3420 and SO3421 are separated by 82 nucleotidesSO3421 and yfiA-2 are separated by 300 nucleotides SO3412: SO3412 - extracellular solute-binding proteins, family 3 protein (NCBI ptt file), at 3,551,415 to 3,552,305 SO3412 SO3413: thrC - threonine synthase (NCBI ptt file), at 3,552,916 to 3,554,199 thrC SO3414: thrB - homoserine kinase (NCBI ptt file), at 3,554,272 to 3,555,210 thrB SO3415: thrA - aspartokinase I/homoserine dehydrogenase, threonine-sensitive (NCBI ptt file), at 3,555,207 to 3,557,675 thrA SO3417: slyD - peptidyl-prolyl cis-trans isomerase SlyD (NCBI ptt file), at 3,558,317 to 3,558,985 slyD SO3417.1: SO3417.1 - peptidyl-prolyl cis-trans isomerase SlyD (NCBI ptt file), at 3,558,774 to 3,559,004 SO3417.1 SO3418: SO3418 - hypothetical protein (NCBI ptt file), at 3,559,178 to 3,559,555 SO3418 SO3419: trpR - trp operon repressor (NCBI ptt file), at 3,559,588 to 3,559,863 trpR SO3420: SO3420 - cytochrome c' (NCBI ptt file), at 3,560,053 to 3,560,502 SO3420 SO3421: SO3421 - b-type cytochrome, putative (NCBI ptt file), at 3,560,585 to 3,561,277 SO3421 SO3422: yfiA-2 - ribosomal subunit interface protein (NCBI ptt file), at 3,561,578 to 3,561,934 yfiA-2
Locus Name Description Strand Phenotype
SO3412 SO3412 extracellular solute-binding proteins, family 3 protein (NCBI ptt file) - insig.
SO3413 thrC threonine synthase (NCBI ptt file) - strong
SO3414 thrB homoserine kinase (NCBI ptt file) - strong
SO3415 thrA aspartokinase I/homoserine dehydrogenase, threonine-sensitive (NCBI ptt file) - strong
SO3417 slyD peptidyl-prolyl cis-trans isomerase SlyD (NCBI ptt file) + strong
SO3417.1 SO3417.1 peptidyl-prolyl cis-trans isomerase SlyD (NCBI ptt file) + no data
SO3418 SO3418 hypothetical protein (NCBI ptt file) + insig.
SO3419 trpR trp operon repressor (NCBI ptt file) - sig.
SO3420 SO3420 cytochrome c' (NCBI ptt file) + insig.
SO3421 SO3421 b-type cytochrome, putative (NCBI ptt file) - insig.
SO3422 yfiA-2 ribosomal subunit interface protein (NCBI ptt file) + sig.

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