Gene info for Dshi_3204 in Dinoroseobacter shibae DFL-12

Updated annotation (from data): allantoinase (EC 3.5.2.5); 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline (OHCU) decarboxylase (EC 4.1.1.97)
Rationale: Specific phenotype: utilization of Adenine hydrochloride, Inosine. The N-terminal part is >50% identical to allantoinases. The C-terminal portion is only 36-37% identical to characterized OHCU decarboxylases (i.e., O32141 or Q283N4), but it is the only OHCU decarboxylase domain encoded in the genome.
Original annotation: Chitin deacetylase (RefSeq)
Type 1: Protein-coding gene
Located on scaffold 57145, - strand, nucleotides 3,368,449 to 3,369,861
See nucleotide sequence around Dshi_3204 or for all of scaffold 57145

Other databases: MicrobesOnline, NCBI, IMG: 2501025090, uniprot: A8LM28

Nearby Genes

500 ntDshi_3199 and Dshi_3200 are separated by 419 nucleotidesDshi_3200 and Dshi_3201 are separated by 204 nucleotidesDshi_3201 and Dshi_3202 are separated by 74 nucleotidesDshi_3202 and Dshi_3203 are separated by 50 nucleotidesDshi_3203 and Dshi_3204 overlap by 4 nucleotidesDshi_3204 and Dshi_3205 are separated by 150 nucleotidesDshi_3205 and Dshi_3206 overlap by 4 nucleotidesDshi_3206 and Dshi_3207 are separated by 48 nucleotidesDshi_3207 and Dshi_3208 are separated by 275 nucleotidesDshi_3208 and Dshi_3209 overlap by 4 nucleotides Dshi_3199: Dshi_3199 - ApbE family lipoprotein (RefSeq), at 3,363,665 to 3,364,573 _3199 Dshi_3200: Dshi_3200 - protein of unknown function DUF861 cupin_3 (RefSeq), at 3,364,993 to 3,365,862 _3200 Dshi_3201: Dshi_3201 - Endoribonuclease L-PSP (RefSeq), at 3,366,067 to 3,366,408 _3201 Dshi_3202: Dshi_3202 - uracil-xanthine permease (RefSeq), at 3,366,483 to 3,367,907 _3202 Dshi_3203: Dshi_3203 - Ureidoglycolate hydrolase (RefSeq), at 3,367,958 to 3,368,452 _3203 Dshi_3204: Dshi_3204 - allantoinase (EC 3.5.2.5); 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline (OHCU) decarboxylase (EC 4.1.1.97) (from data), at 3,368,449 to 3,369,861 _3204 Dshi_3205: Dshi_3205 - Hydroxyisourate hydrolase (RefSeq), at 3,370,012 to 3,370,365 _3205 Dshi_3206: Dshi_3206 - transcriptional regulator, LysR family (RefSeq), at 3,370,362 to 3,371,345 _3206 Dshi_3207: Dshi_3207 - protein of unknown function DUF989 (RefSeq), at 3,371,394 to 3,372,626 _3207 Dshi_3208: Dshi_3208 - hypothetical protein (RefSeq), at 3,372,902 to 3,374,383 _3208 Dshi_3209: Dshi_3209 - hypothetical protein (RefSeq), at 3,374,380 to 3,375,372 _3209
Locus Name Description Strand Phenotype
Dshi_3199 Dshi_3199 ApbE family lipoprotein (RefSeq) + insig.
Dshi_3200 Dshi_3200 protein of unknown function DUF861 cupin_3 (RefSeq) + no data
Dshi_3201 Dshi_3201 Endoribonuclease L-PSP (RefSeq) + insig.
Dshi_3202 Dshi_3202 uracil-xanthine permease (RefSeq) - insig.
Dshi_3203 Dshi_3203 Ureidoglycolate hydrolase (RefSeq) - strong
Dshi_3204 Dshi_3204 allantoinase (EC 3.5.2.5); 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline (OHCU) decarboxylase (EC 4.1.1.97) (from data) - sig.
Dshi_3205 Dshi_3205 Hydroxyisourate hydrolase (RefSeq) + insig.
Dshi_3206 Dshi_3206 transcriptional regulator, LysR family (RefSeq) - sig.
Dshi_3207 Dshi_3207 protein of unknown function DUF989 (RefSeq) + sig.
Dshi_3208 Dshi_3208 hypothetical protein (RefSeq) + insig.
Dshi_3209 Dshi_3209 hypothetical protein (RefSeq) - insig.

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