Gene info for Dshi_2959 in Dinoroseobacter shibae DFL-12

Updated annotation (from data): Xanthine dehydrogenase (EC 1.17.1.4)
Rationale: Specifically important for utilizing Adenine hydrochloride hydrate. Automated validation from mutant phenotype: the predicted function (1.17.1.4) was linked to the condition via a SEED subsystem. This annotation was also checked manually.
Original annotation: Xanthine dehydrogenase molybdopterin binding subunit (RefSeq)
Type 1: Protein-coding gene
Located on scaffold 57145, + strand, nucleotides 3,123,160 to 3,125,505
See nucleotide sequence around Dshi_2959 or for all of scaffold 57145

Other databases: MicrobesOnline, NCBI, IMG: 2501024844, uniprot: A8LKA9

Nearby Genes

500 ntDshi_2954 and Dshi_2955 are separated by 3 nucleotidesDshi_2955 and Dshi_2956 are separated by 88 nucleotidesDshi_2956 and Dshi_2957 are separated by 226 nucleotidesDshi_2957 and Dshi_2958 are separated by 245 nucleotidesDshi_2958 and Dshi_2959 overlap by 4 nucleotidesDshi_2959 and Dshi_2960 overlap by 4 nucleotidesDshi_2960 and Dshi_2961 overlap by 4 nucleotidesDshi_2961 and Dshi_2962 are separated by 222 nucleotidesDshi_2962 and Dshi_2963 are separated by 22 nucleotidesDshi_2963 and Dshi_2964 are separated by 92 nucleotides Dshi_2954: Dshi_2954 - tRNA synthetase class II (G H P and S) (RefSeq), at 3,114,844 to 3,115,950 _2954 Dshi_2955: Dshi_2955 - histidyl-tRNA synthetase (RefSeq), at 3,115,954 to 3,117,447 _2955 Dshi_2956: Dshi_2956 - SlyX family protein (RefSeq), at 3,117,536 to 3,117,745 _2956 Dshi_2957: Dshi_2957 - DNA polymerase III, alpha subunit (RefSeq), at 3,117,972 to 3,121,466 _2957 Dshi_2958: Dshi_2958 - Xanthine dehydrogenase (EC 1.17.1.4) (from data), at 3,121,712 to 3,123,163 _2958 Dshi_2959: Dshi_2959 - Xanthine dehydrogenase (EC 1.17.1.4) (from data), at 3,123,160 to 3,125,505 _2959 Dshi_2960: Dshi_2960 - Xanthine dehydrogenase accessory protein XdhC (RefSeq), at 3,125,502 to 3,126,464 _2960 Dshi_2961: Dshi_2961 - ABC transporter related (RefSeq), at 3,126,461 to 3,127,996 _2961 Dshi_2962: Dshi_2962 - inner-membrane translocator (RefSeq), at 3,128,219 to 3,129,304 _2962 Dshi_2963: Dshi_2963 - inner-membrane translocator (RefSeq), at 3,129,327 to 3,130,253 _2963 Dshi_2964: Dshi_2964 - basic membrane lipoprotein (RefSeq), at 3,130,346 to 3,131,509 _2964
Locus Name Description Strand Phenotype
Dshi_2954 Dshi_2954 tRNA synthetase class II (G H P and S) (RefSeq) - no data
Dshi_2955 Dshi_2955 histidyl-tRNA synthetase (RefSeq) - no data
Dshi_2956 Dshi_2956 SlyX family protein (RefSeq) + no data
Dshi_2957 Dshi_2957 DNA polymerase III, alpha subunit (RefSeq) - no data
Dshi_2958 Dshi_2958 Xanthine dehydrogenase (EC 1.17.1.4) (from data) + sig.
Dshi_2959 Dshi_2959 Xanthine dehydrogenase (EC 1.17.1.4) (from data) + sig.
Dshi_2960 Dshi_2960 Xanthine dehydrogenase accessory protein XdhC (RefSeq) + insig.
Dshi_2961 Dshi_2961 ABC transporter related (RefSeq) + insig.
Dshi_2962 Dshi_2962 inner-membrane translocator (RefSeq) + insig.
Dshi_2963 Dshi_2963 inner-membrane translocator (RefSeq) + sig.
Dshi_2964 Dshi_2964 basic membrane lipoprotein (RefSeq) + insig.

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