Gene info for Dshi_2436 in Dinoroseobacter shibae DFL-12

Updated annotation (from data): rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22)
Rationale: Specifically important for: L-Rhamnose monohydrate. Part of rhamnose catabolism via rhamnulose. TIGR annotates the C terminal part as alcohol dehydrogenase rather than as lactaldehyde dehydrogenase but do not see why (SEED_correct)
Original annotation: rhamnulose-1-phosphate aldolase/alcohol dehydrogenase (RefSeq)
Type 1: Protein-coding gene
Located on scaffold 57145, + strand, nucleotides 2,577,535 to 2,579,637
See nucleotide sequence around Dshi_2436 or for all of scaffold 57145

Other databases: MicrobesOnline, NCBI, IMG: 2501024319, uniprot: A8LS77

Nearby Genes

500 ntDshi_2431 and Dshi_2432 overlap by 4 nucleotidesDshi_2432 and Dshi_2433 are separated by 12 nucleotidesDshi_2433 and Dshi_2434 are separated by 72 nucleotidesDshi_2434 and Dshi_2435 are separated by 38 nucleotidesDshi_2435 and Dshi_2436 are separated by 133 nucleotidesDshi_2436 and Dshi_2437 are separated by 9 nucleotidesDshi_2437 and Dshi_2438 are separated by 107 nucleotidesDshi_2438 and Dshi_2439 overlap by 4 nucleotidesDshi_2439 and Dshi_2440 overlap by 4 nucleotidesDshi_2440 and Dshi_2441 are separated by 60 nucleotides Dshi_2431: Dshi_2431 - Monosaccharide-transporting ATPase (RefSeq), at 2,571,923 to 2,572,909 _2431 Dshi_2432: Dshi_2432 - Monosaccharide-transporting ATPase (RefSeq), at 2,572,906 to 2,573,889 _2432 Dshi_2433: Dshi_2433 - ABC transporter related (RefSeq), at 2,573,902 to 2,575,434 _2433 Dshi_2434: Dshi_2434 - rhamnose ABC transporter, periplasmic rhamnose-binding protein (RefSeq), at 2,575,507 to 2,576,508 _2434 Dshi_2435: Dshi_2435 - transcriptional regulator, DeoR family (RefSeq), at 2,576,547 to 2,577,401 _2435 Dshi_2436: Dshi_2436 - rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) (from data), at 2,577,535 to 2,579,637 _2436 Dshi_2437: Dshi_2437 - L-rhamnose isomerase (EC 5.3.1.14) (from data), at 2,579,647 to 2,580,885 _2437 Dshi_2438: Dshi_2438 - amidohydrolase 2 (RefSeq), at 2,580,993 to 2,581,871 _2438 Dshi_2439: Dshi_2439 - protein of unknown function DUF112 transmembrane (RefSeq), at 2,581,868 to 2,583,352 _2439 Dshi_2440: Dshi_2440 - hypothetical protein (RefSeq), at 2,583,349 to 2,583,807 _2440 Dshi_2441: Dshi_2441 - hypothetical protein (RefSeq), at 2,583,868 to 2,584,830 _2441
Locus Name Description Strand Phenotype
Dshi_2431 Dshi_2431 Monosaccharide-transporting ATPase (RefSeq) - strong
Dshi_2432 Dshi_2432 Monosaccharide-transporting ATPase (RefSeq) - strong
Dshi_2433 Dshi_2433 ABC transporter related (RefSeq) - strong
Dshi_2434 Dshi_2434 rhamnose ABC transporter, periplasmic rhamnose-binding protein (RefSeq) - strong
Dshi_2435 Dshi_2435 transcriptional regulator, DeoR family (RefSeq) - strong
Dshi_2436 Dshi_2436 rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) (from data) + strong
Dshi_2437 Dshi_2437 L-rhamnose isomerase (EC 5.3.1.14) (from data) + strong
Dshi_2438 Dshi_2438 amidohydrolase 2 (RefSeq) - insig.
Dshi_2439 Dshi_2439 protein of unknown function DUF112 transmembrane (RefSeq) - insig.
Dshi_2440 Dshi_2440 hypothetical protein (RefSeq) - insig.
Dshi_2441 Dshi_2441 hypothetical protein (RefSeq) - insig.

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