Gene info for Dshi_2244 in Dinoroseobacter shibae DFL-12

Updated annotation (from data): DNA repair endonuclease mmcB (DUF1052)
Rationale: Conserved and specific phenotype: important for resisting cisplatin. Also see PMID:26162909 which suggests a role for a homologous protein from Caulobacter in creating substrates for translesion synthesis
Original annotation: protein of unknown function DUF1052 (RefSeq)
Type 1: Protein-coding gene
Located on scaffold 57145, - strand, nucleotides 2,367,721 to 2,368,161
See nucleotide sequence around Dshi_2244 or for all of scaffold 57145

Other databases: MicrobesOnline, NCBI, IMG: 2501024126, uniprot: A8LR57

Nearby Genes

500 ntDshi_2239 and Dshi_2240 are separated by 69 nucleotidesDshi_2240 and Dshi_2241 are separated by 13 nucleotidesDshi_2241 and Dshi_2242 overlap by 38 nucleotidesDshi_2242 and Dshi_2243 are separated by 89 nucleotidesDshi_2243 and Dshi_2244 are separated by 55 nucleotidesDshi_2244 and Dshi_2245 are separated by 261 nucleotidesDshi_2245 and Dshi_2246 are separated by 242 nucleotidesDshi_2246 and Dshi_2247 are separated by 61 nucleotidesDshi_2247 and Dshi_2248 are separated by 112 nucleotidesDshi_2248 and Dshi_2249 are separated by 8 nucleotides Dshi_2239: Dshi_2239 - short-chain dehydrogenase/reductase SDR (RefSeq), at 2,363,027 to 2,363,779 _2239 Dshi_2240: Dshi_2240 - hypothetical protein (RefSeq), at 2,363,849 to 2,364,484 _2240 Dshi_2241: Dshi_2241 - protein of unknown function DUF1486 (RefSeq), at 2,364,498 to 2,365,532 _2241 Dshi_2242: Dshi_2242 - Histidinol dehydrogenase (RefSeq), at 2,365,495 to 2,366,820 _2242 Dshi_2243: Dshi_2243 - alpha/beta hydrolase fold (RefSeq), at 2,366,910 to 2,367,665 _2243 Dshi_2244: Dshi_2244 - DNA repair endonuclease mmcB (DUF1052) (from data), at 2,367,721 to 2,368,161 _2244 Dshi_2245: Dshi_2245 - hypothetical protein (RefSeq), at 2,368,423 to 2,368,770 _2245 Dshi_2246: Dshi_2246 - ISSpo6, transposase OrfB (RefSeq), at 2,369,013 to 2,369,543 _2246 Dshi_2247: Dshi_2247 - ISSpo6, transposase orf A (RefSeq), at 2,369,605 to 2,369,967 _2247 Dshi_2248: Dshi_2248 - putative aggregation factor core (RefSeq), at 2,370,080 to 2,370,526 _2248 Dshi_2249: Dshi_2249 - NusB antitermination factor (RefSeq), at 2,370,535 to 2,371,014 _2249
Locus Name Description Strand Phenotype
Dshi_2239 Dshi_2239 short-chain dehydrogenase/reductase SDR (RefSeq) - insig.
Dshi_2240 Dshi_2240 hypothetical protein (RefSeq) - insig.
Dshi_2241 Dshi_2241 protein of unknown function DUF1486 (RefSeq) - insig.
Dshi_2242 Dshi_2242 Histidinol dehydrogenase (RefSeq) - insig.
Dshi_2243 Dshi_2243 alpha/beta hydrolase fold (RefSeq) - insig.
Dshi_2244 Dshi_2244 DNA repair endonuclease mmcB (DUF1052) (from data) - strong
Dshi_2245 Dshi_2245 hypothetical protein (RefSeq) - insig.
Dshi_2246 Dshi_2246 ISSpo6, transposase OrfB (RefSeq) - no data
Dshi_2247 Dshi_2247 ISSpo6, transposase orf A (RefSeq) - no data
Dshi_2248 Dshi_2248 putative aggregation factor core (RefSeq) + insig.
Dshi_2249 Dshi_2249 NusB antitermination factor (RefSeq) - no data

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