Gene info for Dshi_1669 in Dinoroseobacter shibae DFL-12

Updated annotation (from data): Nitrate reductase (EC 1.7.99.4)
Rationale: Specifically important for utilizing Sodium nitrate. Automated validation from mutant phenotype: the predicted function (1.7.99.4) was linked to the condition via a SEED subsystem. This annotation was also checked manually.
Original annotation: molybdopterin oxidoreductase (RefSeq)
Type 1: Protein-coding gene
Located on scaffold 57145, + strand, nucleotides 1,736,304 to 1,738,925
See nucleotide sequence around Dshi_1669 or for all of scaffold 57145

Other databases: MicrobesOnline, NCBI, IMG: 2501023539, uniprot: A8LLN3

Nearby Genes

500 ntDshi_1664 and Dshi_1665 are separated by 6 nucleotidesDshi_1665 and Dshi_1666 are separated by 128 nucleotidesDshi_1666 and Dshi_1667 are separated by 54 nucleotidesDshi_1667 and Dshi_1668 overlap by 4 nucleotidesDshi_1668 and Dshi_1669 are separated by 5 nucleotidesDshi_1669 and Dshi_1670 overlap by 4 nucleotidesDshi_1670 and Dshi_1671 are separated by 16 nucleotidesDshi_1671 and Dshi_1672 are separated by 43 nucleotidesDshi_1672 and Dshi_1673 overlap by 29 nucleotidesDshi_1673 and Dshi_1674 are separated by 252 nucleotides Dshi_1664: Dshi_1664 - binding-protein-dependent transport systems inner membrane component (RefSeq), at 1,730,124 to 1,731,206 _1664 Dshi_1665: Dshi_1665 - nitrate ABC transporter, ATPase subunits C and D (RefSeq), at 1,731,213 to 1,732,898 _1665 Dshi_1666: Dshi_1666 - globin (RefSeq), at 1,733,027 to 1,733,473 _1666 Dshi_1667: Dshi_1667 - Nitrite reductase (NAD(P)H) (EC 1.7.1.4) (from data), at 1,733,528 to 1,735,960 _1667 Dshi_1668: Dshi_1668 - nitrite reductase (NAD(P)H), small subunit (RefSeq), at 1,735,957 to 1,736,298 _1668 Dshi_1669: Dshi_1669 - Nitrate reductase (EC 1.7.99.4) (from data), at 1,736,304 to 1,738,925 _1669 Dshi_1670: Dshi_1670 - glycosyl transferase family 3 (RefSeq), at 1,738,922 to 1,739,893 _1670 Dshi_1671: Dshi_1671 - uroporphyrin-III C-methyltransferase (RefSeq), at 1,739,910 to 1,741,304 _1671 Dshi_1672: Dshi_1672 - ribosomal RNA methyltransferase RrmJ/FtsJ (RefSeq), at 1,741,348 to 1,742,121 _1672 Dshi_1673: Dshi_1673 - Ppx/GppA phosphatase (RefSeq), at 1,742,093 to 1,743,274 _1673 Dshi_1674: Dshi_1674 - hypothetical protein (RefSeq), at 1,743,527 to 1,743,829 _1674
Locus Name Description Strand Phenotype
Dshi_1664 Dshi_1664 binding-protein-dependent transport systems inner membrane component (RefSeq) + sig.
Dshi_1665 Dshi_1665 nitrate ABC transporter, ATPase subunits C and D (RefSeq) + cofit
Dshi_1666 Dshi_1666 globin (RefSeq) + sig.
Dshi_1667 Dshi_1667 Nitrite reductase (NAD(P)H) (EC 1.7.1.4) (from data) + sig.
Dshi_1668 Dshi_1668 nitrite reductase (NAD(P)H), small subunit (RefSeq) + sig.
Dshi_1669 Dshi_1669 Nitrate reductase (EC 1.7.99.4) (from data) + sig.
Dshi_1670 Dshi_1670 glycosyl transferase family 3 (RefSeq) + insig.
Dshi_1671 Dshi_1671 uroporphyrin-III C-methyltransferase (RefSeq) + insig.
Dshi_1672 Dshi_1672 ribosomal RNA methyltransferase RrmJ/FtsJ (RefSeq) - no data
Dshi_1673 Dshi_1673 Ppx/GppA phosphatase (RefSeq) - strong
Dshi_1674 Dshi_1674 hypothetical protein (RefSeq) + no data

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