Gene info for Dshi_0723 in Dinoroseobacter shibae DFL-12

Updated annotation (from data): Propionyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.3)
Rationale: Specifically important for utilizing Sodium propionate. Automated validation from mutant phenotype: the predicted function (PROPIONYL-COA-CARBOXY-RXN) was linked to the condition via a MetaCyc pathway. This annotation was also checked manually.
Original annotation: Carbamoyl-phosphate synthase L chain ATP-binding (RefSeq)
Type 1: Protein-coding gene
Located on scaffold 57145, + strand, nucleotides 729,769 to 731,814
See nucleotide sequence around Dshi_0723 or for all of scaffold 57145

Other databases: MicrobesOnline, NCBI, IMG: 2501022583, uniprot: A8LQS5

Nearby Genes

500 ntDshi_0718 and Dshi_0719 are separated by 99 nucleotidesDshi_0719 and Dshi_0720 overlap by 8 nucleotidesDshi_0720 and Dshi_0721 overlap by 4 nucleotidesDshi_0721 and Dshi_0722 are separated by 14 nucleotidesDshi_0722 and Dshi_0723 are separated by 358 nucleotidesDshi_0723 and Dshi_0724 are separated by 64 nucleotidesDshi_0724 and Dshi_0725 are separated by 108 nucleotidesDshi_0725 and Dshi_0726 overlap by 29 nucleotidesDshi_0726 and Dshi_0727 are separated by 178 nucleotidesDshi_0727 and Dshi_0728 are separated by 353 nucleotides Dshi_0718: Dshi_0718 - Propionyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.3) (from data), at 726,256 to 727,788 _0718 Dshi_0719: Dshi_0719 - hypothetical protein (RefSeq), at 727,888 to 728,286 _0719 Dshi_0720: Dshi_0720 - Endoribonuclease L-PSP (RefSeq), at 728,279 to 728,668 _0720 Dshi_0721: Dshi_0721 - hypothetical protein (RefSeq), at 728,665 to 729,036 _0721 Dshi_0722: Dshi_0722 - hypothetical protein (RefSeq), at 729,051 to 729,410 _0722 Dshi_0723: Dshi_0723 - Propionyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.3) (from data), at 729,769 to 731,814 _0723 Dshi_0724: Dshi_0724 - hypothetical protein (RefSeq), at 731,879 to 732,328 _0724 Dshi_0725: Dshi_0725 - hypothetical protein (RefSeq), at 732,437 to 733,432 _0725 Dshi_0726: Dshi_0726 - methylmalonyl-CoA mutase, large subunit (RefSeq), at 733,404 to 735,542 _0726 Dshi_0727: Dshi_0727 - transcriptional regulator, LysR family (RefSeq), at 735,721 to 736,650 _0727 Dshi_0728: Dshi_0728 - NADH dehydrogenase (quinone) (RefSeq), at 737,004 to 739,244 _0728
Locus Name Description Strand Phenotype
Dshi_0718 Dshi_0718 Propionyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.3) (from data) + strong
Dshi_0719 Dshi_0719 hypothetical protein (RefSeq) + sig.
Dshi_0720 Dshi_0720 Endoribonuclease L-PSP (RefSeq) + sig.
Dshi_0721 Dshi_0721 hypothetical protein (RefSeq) + insig.
Dshi_0722 Dshi_0722 hypothetical protein (RefSeq) + sig.
Dshi_0723 Dshi_0723 Propionyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.3) (from data) + strong
Dshi_0724 Dshi_0724 hypothetical protein (RefSeq) - strong
Dshi_0725 Dshi_0725 hypothetical protein (RefSeq) + cofit
Dshi_0726 Dshi_0726 methylmalonyl-CoA mutase, large subunit (RefSeq) + no data
Dshi_0727 Dshi_0727 transcriptional regulator, LysR family (RefSeq) - insig.
Dshi_0728 Dshi_0728 NADH dehydrogenase (quinone) (RefSeq) + strong

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