Gene info for Dshi_0546 in Dinoroseobacter shibae DFL-12

Updated annotation (from data): ABC transporter for Xylitol, ATPase component
Rationale: Specific phenotype on Xylitol.
Original annotation: ABC transporter related (RefSeq)
Type 1: Protein-coding gene
Located on scaffold 57145, - strand, nucleotides 532,894 to 533,910
See nucleotide sequence around Dshi_0546 or for all of scaffold 57145

Other databases: MicrobesOnline, NCBI, IMG: 2501022401, uniprot: A8LPG9

Nearby Genes

500 ntDshi_0541 and Dshi_0542 are separated by 420 nucleotidesDshi_0542 and Dshi_0543 are separated by 76 nucleotidesDshi_0543 and Dshi_0544 are separated by 46 nucleotidesDshi_0544 and Dshi_0545 are separated by 52 nucleotidesDshi_0545 and Dshi_0546 are separated by 9 nucleotidesDshi_0546 and Dshi_0547 are separated by 160 nucleotidesDshi_0547 and Dshi_0548 are separated by 74 nucleotidesDshi_0548 and Dshi_0549 are separated by 3 nucleotidesDshi_0549 and Dshi_0550 are separated by 68 nucleotidesDshi_0550 and Dshi_0551 are separated by 19 nucleotides Dshi_0541: Dshi_0541 - oxygen-independent coproporphyrinogen III oxidase (RefSeq), at 526,456 to 527,820 _0541 Dshi_0542: Dshi_0542 - phosphate transporter (RefSeq), at 528,241 to 529,869 _0542 Dshi_0543: Dshi_0543 - Na+/Picotransporter (RefSeq), at 529,946 to 531,796 _0543 Dshi_0544: Dshi_0544 - hypothetical protein (RefSeq), at 531,843 to 532,091 _0544 Dshi_0545: Dshi_0545 - HAD-superfamily hydrolase, subfamily IA, variant 3 (RefSeq), at 532,144 to 532,884 _0545 Dshi_0546: Dshi_0546 - ABC transporter for Xylitol, ATPase component (from data), at 532,894 to 533,910 _0546 Dshi_0547: Dshi_0547 - ABC transporter for Xylitol, periplasmic substrate-binding component (from data), at 534,071 to 535,414 _0547 Dshi_0548: Dshi_0548 - ABC transporter for Xylitol, permease component 1 (from data), at 535,489 to 536,355 _0548 Dshi_0549: Dshi_0549 - ABC transporter for Xylitol, permease component 2 (from data), at 536,359 to 537,177 _0549 Dshi_0550: Dshi_0550 - transcriptional regulator, DeoR family (RefSeq), at 537,246 to 538,217 _0550 Dshi_0551: Dshi_0551 - D-xylulose reductase (EC 1.1.1.9) (from data), at 538,237 to 539,280 _0551
Locus Name Description Strand Phenotype
Dshi_0541 Dshi_0541 oxygen-independent coproporphyrinogen III oxidase (RefSeq) + insig.
Dshi_0542 Dshi_0542 phosphate transporter (RefSeq) - cofit
Dshi_0543 Dshi_0543 Na+/Picotransporter (RefSeq) + insig.
Dshi_0544 Dshi_0544 hypothetical protein (RefSeq) + insig.
Dshi_0545 Dshi_0545 HAD-superfamily hydrolase, subfamily IA, variant 3 (RefSeq) - insig.
Dshi_0546 Dshi_0546 ABC transporter for Xylitol, ATPase component (from data) - strong
Dshi_0547 Dshi_0547 ABC transporter for Xylitol, periplasmic substrate-binding component (from data) + strong
Dshi_0548 Dshi_0548 ABC transporter for Xylitol, permease component 1 (from data) + strong
Dshi_0549 Dshi_0549 ABC transporter for Xylitol, permease component 2 (from data) + strong
Dshi_0550 Dshi_0550 transcriptional regulator, DeoR family (RefSeq) + strong
Dshi_0551 Dshi_0551 D-xylulose reductase (EC 1.1.1.9) (from data) + strong

Or browse nearby genes

Or see the comparative fitness browser