Gene info for BT4250 in Bacteroides thetaiotaomicron VPI-5482

Annotation: RNA polymerase ECF-type sigma factor (NCBI ptt file)
Type 1: Protein-coding gene
Located on scaffold 241, + strand, nucleotides 5,600,726 to 5,601,271
See nucleotide sequence around BT4250 or for all of scaffold 241

Other databases: MicrobesOnline, NCBI, refseq: BT_RS21445, uniprot: Q89ZX1

Nearby Genes

500 ntBT4245 and BT4246 are separated by 36 nucleotidesBT4246 and BT4247 are separated by 18 nucleotidesBT4247 and BT4248 are separated by 50 nucleotidesBT4248 and BT4249 are separated by 266 nucleotidesBT4249 and BT4250 are separated by 129 nucleotidesBT4250 and BT4251 are separated by 64 nucleotidesBT4251 and BT4252 are separated by 39 nucleotidesBT4252 and tRNA-Gly are separated by 61 nucleotidestRNA-Gly and tRNA-Tyr are separated by 5 nucleotidestRNA-Tyr and ribH are separated by 50 nucleotides BT4245: BT4245 - conserved hypothetical protein (NCBI ptt file), at 5,592,763 to 5,594,055 BT4245 BT4246: BT4246 - putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file), at 5,594,092 to 5,596,020 BT4246 BT4247: BT4247 - putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file), at 5,596,039 to 5,599,392 BT4247 BT4248: BT4248 - putative anti-sigma factor (NCBI ptt file), at 5,599,443 to 5,600,096 BT4248 BT4249: BT4249 - hypothetical protein (NCBI ptt file), at 5,600,363 to 5,600,596 BT4249 BT4250: BT4250 - RNA polymerase ECF-type sigma factor (NCBI ptt file), at 5,600,726 to 5,601,271 BT4250 BT4251: BT4251 - hypothetical protein (NCBI ptt file), at 5,601,336 to 5,603,183 BT4251 BT4252: BT4252 - putative oxidoreductase (NCBI ptt file), at 5,603,223 to 5,604,482 BT4252 BT_t66: tRNA-Gly - tRNA-Gly (RefSeq), at 5,604,544 to 5,604,616 tRNA-Gly BT_t67: tRNA-Tyr - tRNA-Tyr (RefSeq), at 5,604,622 to 5,604,707 tRNA-Tyr BT_4253: ribH - riboflavin synthase subunit beta (RefSeq), at 5,604,758 to 5,605,252 ribH
Locus Name Description Strand Phenotype
BT4245 BT4245 conserved hypothetical protein (NCBI ptt file) - insig.
BT4246 BT4246 putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) - insig.
BT4247 BT4247 putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) - insig.
BT4248 BT4248 putative anti-sigma factor (NCBI ptt file) - sig.
BT4249 BT4249 hypothetical protein (NCBI ptt file) + strong
BT4250 BT4250 RNA polymerase ECF-type sigma factor (NCBI ptt file) + sig.
BT4251 BT4251 hypothetical protein (NCBI ptt file) - insig.
BT4252 BT4252 putative oxidoreductase (NCBI ptt file) - insig.
BT_t66 tRNA-Gly tRNA-Gly (RefSeq) - no data
BT_t67 tRNA-Tyr tRNA-Tyr (RefSeq) - no data
BT_4253 ribH riboflavin synthase subunit beta (RefSeq) - no data

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