Gene info for BT4215 in Bacteroides thetaiotaomicron VPI-5482

Updated annotation (from data): shikimate dehydrogenase (EC 1.1.1.25)
Rationale: A conserved essential gene. This activity is necessary to explain chorismate biosynthesis. 36% identical to shikimate dehydrogenase from Aquifex aeolicus (O67049).
Original annotation: shikimate 5-dehydrogenase (NCBI ptt file)
Type 1: Protein-coding gene
Located on scaffold 241, - strand, nucleotides 5,552,093 to 5,552,839
See nucleotide sequence around BT4215 or for all of scaffold 241

Other databases: MicrobesOnline, NCBI, refseq: BT_RS21260, uniprot: Q8A006

Nearby Genes

500 ntBT4210 and BT4211 are separated by 3 nucleotidesBT4211 and BT4212 are separated by 325 nucleotidesBT4212 and BT4213 are separated by 50 nucleotidesBT4213 and BT4214 are separated by 72 nucleotidesBT4214 and BT4215 are separated by 152 nucleotidesBT4215 and BT4216 are separated by 38 nucleotidesBT4216 and BT4217 are separated by 2 nucleotidesBT4217 and BT4218 are separated by 46 nucleotidesBT4218 and BT4219 are separated by 90 nucleotidesBT4219 and BT4220 are separated by 83 nucleotides BT4210: BT4210 - peptide chain release factor 1 (NCBI ptt file), at 5,546,853 to 5,547,965 BT4210 BT4211: BT4211 - putative phosphoribosylformylglycinamidine cyclo-ligase (NCBI ptt file), at 5,547,969 to 5,549,135 BT4211 BT4212: BT4212 - conserved hypothetical protein (NCBI ptt file), at 5,549,461 to 5,550,042 BT4212 BT4213: BT4213 - conserved hypothetical protein (NCBI ptt file), at 5,550,093 to 5,550,995 BT4213 BT4214: BT4214 - conserved hypothetical protein (NCBI ptt file), at 5,551,068 to 5,551,940 BT4214 BT4215: BT4215 - shikimate dehydrogenase (EC 1.1.1.25) (from data), at 5,552,093 to 5,552,839 BT4215 BT4216: BT4216 - ubiquinone/menaquinone biosynthesis methyltransferase (NCBI ptt file), at 5,552,878 to 5,553,615 BT4216 BT4217: BT4217 - phosphoribosylamidoimidazole-succinocarboxamide synthase (NCBI ptt file), at 5,553,618 to 5,554,562 BT4217 BT4218: BT4218 - phosphate starvation-inducible protein, PhoH (NCBI ptt file), at 5,554,609 to 5,555,625 BT4218 BT4219: BT4219 - hypothetical protein (NCBI ptt file), at 5,555,716 to 5,556,393 BT4219 BT4220: BT4220 - flotillin-like protein (NCBI ptt file), at 5,556,477 to 5,558,135 BT4220
Locus Name Description Strand Phenotype
BT4210 BT4210 peptide chain release factor 1 (NCBI ptt file) - no data
BT4211 BT4211 putative phosphoribosylformylglycinamidine cyclo-ligase (NCBI ptt file) - strong
BT4212 BT4212 conserved hypothetical protein (NCBI ptt file) - insig.
BT4213 BT4213 conserved hypothetical protein (NCBI ptt file) - strong
BT4214 BT4214 conserved hypothetical protein (NCBI ptt file) - sig.
BT4215 BT4215 shikimate dehydrogenase (EC 1.1.1.25) (from data) - no data
BT4216 BT4216 ubiquinone/menaquinone biosynthesis methyltransferase (NCBI ptt file) - no data
BT4217 BT4217 phosphoribosylamidoimidazole-succinocarboxamide synthase (NCBI ptt file) - no data
BT4218 BT4218 phosphate starvation-inducible protein, PhoH (NCBI ptt file) - insig.
BT4219 BT4219 hypothetical protein (NCBI ptt file) - sig.
BT4220 BT4220 flotillin-like protein (NCBI ptt file) - insig.

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