Gene info for BT3568 in Bacteroides thetaiotaomicron VPI-5482

Updated annotation (from data): outer membrane binding protein for laminaribiose (SusD-like)
Rationale: Specifically important in carbon source Laminaribiose. An adjacent SusC-like protein (BT3569) has similar phenotypes. BT3568 probably binds laminaribiose and promotes transport by BT3569 through the outer membrane.
Original annotation: putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file)
Type 1: Protein-coding gene
Located on scaffold 241, - strand, nucleotides 4,619,006 to 4,620,535
See nucleotide sequence around BT3568 or for all of scaffold 241

Other databases: MicrobesOnline, NCBI, refseq: BT_RS18015, uniprot: Q8A1U0

Nearby Genes

500 ntBT3563 and BT3564 are separated by 171 nucleotidesBT3564 and BT3565 are separated by 1687 nucleotidesBT3565 and BT3566 are separated by 27 nucleotidesBT3566 and BT3567 are separated by 122 nucleotidesBT3567 and BT3568 are separated by 30 nucleotidesBT3568 and BT3569 are separated by 103 nucleotidesBT3569 and BT3570 are separated by 123 nucleotidesBT3570 and BT3571 are separated by 151 nucleotidesBT3571 and BT3572 are separated by 194 nucleotidesBT3572 and BT3573 are separated by 23 nucleotides BT3563: BT3563 - putative endonuclease precursor (NCBI ptt file), at 4,609,403 to 4,610,284 BT3563 BT3564: BT3564 - hypothetical protein (NCBI ptt file), at 4,610,456 to 4,610,896 BT3564 BT3565: BT3565 - putative TonB-dependent receptor (NCBI ptt file), at 4,612,584 to 4,615,145 BT3565 BT3566: BT3566 - conserved hypothetical protein (NCBI ptt file), at 4,615,173 to 4,616,537 BT3566 BT3567: BT3567 - periplasmic beta-1,2-glucosidase / beta-1,3-glucosidase (from data), at 4,616,660 to 4,618,975 BT3567 BT3568: BT3568 - outer membrane binding protein for laminaribiose (SusD-like) (from data), at 4,619,006 to 4,620,535 BT3568 BT3569: BT3569 - TonB-dependent receptor for laminaribiose (SusC-like) (from data), at 4,620,639 to 4,623,704 BT3569 BT3570: BT3570 - TPR-repeat-containing proteins (NCBI ptt file), at 4,623,828 to 4,625,528 BT3570 BT3571: BT3571 - hypothetical protein (NCBI ptt file), at 4,625,680 to 4,626,036 BT3571 BT3572: BT3572 - hypothetical protein (NCBI ptt file), at 4,626,231 to 4,626,995 BT3572 BT3573: BT3573 - hypothetical protein (NCBI ptt file), at 4,627,019 to 4,627,366 BT3573
Locus Name Description Strand Phenotype
BT3563 BT3563 putative endonuclease precursor (NCBI ptt file) + insig.
BT3564 BT3564 hypothetical protein (NCBI ptt file) - insig.
BT3565 BT3565 putative TonB-dependent receptor (NCBI ptt file) + insig.
BT3566 BT3566 conserved hypothetical protein (NCBI ptt file) - insig.
BT3567 BT3567 periplasmic beta-1,2-glucosidase / beta-1,3-glucosidase (from data) - strong
BT3568 BT3568 outer membrane binding protein for laminaribiose (SusD-like) (from data) - strong
BT3569 BT3569 TonB-dependent receptor for laminaribiose (SusC-like) (from data) - strong
BT3570 BT3570 TPR-repeat-containing proteins (NCBI ptt file) + insig.
BT3571 BT3571 hypothetical protein (NCBI ptt file) + insig.
BT3572 BT3572 hypothetical protein (NCBI ptt file) + sig.
BT3573 BT3573 hypothetical protein (NCBI ptt file) + sig.

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