Gene info for BT3233 in Bacteroides thetaiotaomicron VPI-5482

Updated annotation (from data): predicted glycosaminoglycan binding protein (DUF4861)
Rationale: Specifically important in carbon source Heparin sodium salt from porcine intestinal mucosa; carbon source Chondroitin sulfate A sodium salt from bovine trachea; and perhaps carbon source hyaluronic acid. Belongs to the galactose mutarotase-like domain superfamily, which are thought to be carbohydrate-binding proteins (see InterPro IPR011013). Also, this family (PF16153) is predicted by the PFam curators to bind carbohydrates because of its conserved proximity to glycosyl hydrolyase family 88.
Original annotation: hypothetical protein (NCBI ptt file)
Type 1: Protein-coding gene
Located on scaffold 241, + strand, nucleotides 4,122,930 to 4,124,174
See nucleotide sequence around BT3233 or for all of scaffold 241

Other databases: MicrobesOnline, NCBI, refseq: BT_RS16370, uniprot: Q8A2S2

Nearby Genes

500 ntBT3229 and BT3230 are separated by 84 nucleotidesBT3230 and tRNA-Gln are separated by 108 nucleotidestRNA-Gln and BT3231 are separated by 264 nucleotidesBT3231 and BT3232 are separated by 39 nucleotidesBT3232 and BT3233 are separated by 152 nucleotidesBT3233 and BT3234 are separated by 278 nucleotidesBT3234 and BT3235 are separated by 205 nucleotidesBT3235 and BT3236 are separated by 17 nucleotidesBT3236 and BT3237 are separated by 12 nucleotidesBT3237 and BT3238 are separated by 13 nucleotides BT3229: BT3229 - TatD-related DNase (NCBI ptt file), at 4,118,579 to 4,119,268 BT3229 BT3230: BT3230 - tyrosyl-tRNA synthetase (NCBI ptt file), at 4,119,353 to 4,120,645 BT3230 BT_t54: tRNA-Gln - tRNA-Gln (RefSeq), at 4,120,754 to 4,120,827 tRNA-Gln BT3231: BT3231 - 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (NCBI ptt file), at 4,121,092 to 4,121,934 BT3231 BT3232: BT3232 - gluconate 5-dehydrogenase (NCBI ptt file), at 4,121,974 to 4,122,777 BT3232 BT3233: BT3233 - predicted glycosaminoglycan binding protein (DUF4861) (from data), at 4,122,930 to 4,124,174 BT3233 BT3234: BT3234 - hypothetical protein (NCBI ptt file), at 4,124,453 to 4,125,643 BT3234 BT3235: BT3235 - conserved hypothetical protein (NCBI ptt file), at 4,125,849 to 4,126,883 BT3235 BT3236: BT3236 - hypothetical protein (NCBI ptt file), at 4,126,901 to 4,128,157 BT3236 BT3237: BT3237 - hypothetical protein (NCBI ptt file), at 4,128,170 to 4,129,048 BT3237 BT3238: BT3238 - hypothetical protein (NCBI ptt file), at 4,129,062 to 4,130,621 BT3238
Locus Name Description Strand Phenotype
BT3229 BT3229 TatD-related DNase (NCBI ptt file) + sig.
BT3230 BT3230 tyrosyl-tRNA synthetase (NCBI ptt file) + no data
BT_t54 tRNA-Gln tRNA-Gln (RefSeq) + no data
BT3231 BT3231 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (NCBI ptt file) + strong
BT3232 BT3232 gluconate 5-dehydrogenase (NCBI ptt file) + sig.
BT3233 BT3233 predicted glycosaminoglycan binding protein (DUF4861) (from data) + strong
BT3234 BT3234 hypothetical protein (NCBI ptt file) - insig.
BT3235 BT3235 conserved hypothetical protein (NCBI ptt file) - cofit
BT3236 BT3236 hypothetical protein (NCBI ptt file) - cofit
BT3237 BT3237 hypothetical protein (NCBI ptt file) - cofit
BT3238 BT3238 hypothetical protein (NCBI ptt file) - cofit

Or browse nearby genes

Or see the comparative fitness browser