Gene info for SO_r016 in Shewanella oneidensis MR-1

Name: Sp5SG
Annotation: 5S ribosomal RNA (RefSeq)
Type 4: 5S ribosomal RNA
Located on scaffold 139, - strand, nucleotides 4,376,975 to 4,377,094
See nucleotide sequence around SO_r016 or for all of scaffold 139

Other databases: MicrobesOnline

Nearby Genes

500 ntSO4206 and SO4207 overlap by 8 nucleotidesSO4207 and hemB-2 are separated by 9 nucleotideshemB-2 and SO4209 are separated by 240 nucleotidesSO4209 and SO4210 are separated by 187 nucleotidesSO4210 and Sp5SG are separated by 151 nucleotidesSp5SG and Sp23SG are separated by 203 nucleotidesSp23SG and tRNA-Ala-2 are separated by 274 nucleotidestRNA-Ala-2 and tRNA-Ile-2 are separated by 138 nucleotidestRNA-Ile-2 and Sp16SG are separated by 75 nucleotidesSp16SG and secA are separated by 716 nucleotides SO4206: SO4206 - hydrolase, TatD family (NCBI ptt file), at 4,371,908 to 4,372,711 SO4206 SO4207: SO4207 - GGDEF domain protein (NCBI ptt file), at 4,372,704 to 4,374,581 SO4207 SO4208: hemB-2 - delta-aminolevulinic acid dehydratase (NCBI ptt file), at 4,374,591 to 4,375,601 hemB-2 SO4209: SO4209 - conserved hypothetical protein (NCBI ptt file), at 4,375,842 to 4,376,090 SO4209 SO4210: SO4210 - hypothetical protein (NCBI ptt file), at 4,376,278 to 4,376,823 SO4210 SO_r016: Sp5SG - 5S ribosomal RNA (RefSeq), at 4,376,975 to 4,377,094 Sp5SG SO_r017: Sp23SG - 23S ribosomal RNA (RefSeq), at 4,377,298 to 4,380,190 Sp23SG SO_t095: tRNA-Ala-2 - tRNA-Ala (RefSeq), at 4,380,465 to 4,380,540 tRNA-Ala-2 SO_t096: tRNA-Ile-2 - tRNA-Ile (RefSeq), at 4,380,679 to 4,380,755 tRNA-Ile-2 SO_r018: Sp16SG - 16S ribosomal RNA (RefSeq), at 4,380,831 to 4,382,359 Sp16SG SO4211: secA - preprotein translocase, SecA subunit (NCBI ptt file), at 4,383,076 to 4,385,802 secA
Locus Name Description Strand Phenotype
SO4206 SO4206 hydrolase, TatD family (NCBI ptt file) + strong
SO4207 SO4207 GGDEF domain protein (NCBI ptt file) + strong
SO4208 hemB-2 delta-aminolevulinic acid dehydratase (NCBI ptt file) + insig.
SO4209 SO4209 conserved hypothetical protein (NCBI ptt file) - insig.
SO4210 SO4210 hypothetical protein (NCBI ptt file) - insig.
SO_r016 Sp5SG 5S ribosomal RNA (RefSeq) - no data
SO_r017 Sp23SG 23S ribosomal RNA (RefSeq) - no data
SO_t095 tRNA-Ala-2 tRNA-Ala (RefSeq) - no data
SO_t096 tRNA-Ile-2 tRNA-Ile (RefSeq) - no data
SO_r018 Sp16SG 16S ribosomal RNA (RefSeq) - no data
SO4211 secA preprotein translocase, SecA subunit (NCBI ptt file) - no data

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