Gene info for SO_r006 in Shewanella oneidensis MR-1

Name: Sp5SB
Annotation: 5S ribosomal RNA (RefSeq)
Type 4: 5S ribosomal RNA
Located on scaffold 139, + strand, nucleotides 222,053 to 222,172
See nucleotide sequence around SO_r006 or for all of scaffold 139

Other databases: MicrobesOnline

Nearby Genes

500 ntSO0208 and Sp16SB are separated by 682 nucleotidesSp16SB and tRNA-Ile-1 are separated by 75 nucleotidestRNA-Ile-1 and tRNA-Ala-1 are separated by 138 nucleotidestRNA-Ala-1 and Sp23SB are separated by 274 nucleotidesSp23SB and Sp5SB are separated by 203 nucleotidesSp5SB and SO0208.1 are separated by 417 nucleotidesSO0208.1 and SO0211 are separated by 22 nucleotidesSO0211 and murB are separated by 277 nucleotidesmurB and birA overlap by 8 nucleotidesbirA and panK are separated by 2 nucleotides SO0208: SO0208 - RNA-binding protein (NCBI ptt file), at 215,641 to 216,105 SO0208 SO_r004: Sp16SB - 16S ribosomal RNA (RefSeq), at 216,788 to 218,316 Sp16SB SO_t003: tRNA-Ile-1 - tRNA-Ile (RefSeq), at 218,392 to 218,468 tRNA-Ile-1 SO_t004: tRNA-Ala-1 - tRNA-Ala (RefSeq), at 218,607 to 218,682 tRNA-Ala-1 SO_r005: Sp23SB - 23S ribosomal RNA (RefSeq), at 218,957 to 221,849 Sp23SB SO_r006: Sp5SB - 5S ribosomal RNA (RefSeq), at 222,053 to 222,172 Sp5SB SO0208.1: SO0208.1 - putative transposase (NCBI ptt file), at 222,590 to 222,898 SO0208.1 SO0211: SO0211 - ISSod10, transposase OrfA (NCBI ptt file), at 222,921 to 223,361 SO0211 SO0213: murB - UDP-N-acetylenolpyruvoylglucosamine reductase (NCBI ptt file), at 223,639 to 224,664 murB SO0214: birA - birA bifunctional protein (NCBI ptt file), at 224,657 to 225,616 birA SO0215: panK - pantothenate kinase (NCBI ptt file), at 225,619 to 226,569 panK
Locus Name Description Strand Phenotype
SO0208 SO0208 RNA-binding protein (NCBI ptt file) - strong
SO_r004 Sp16SB 16S ribosomal RNA (RefSeq) + no data
SO_t003 tRNA-Ile-1 tRNA-Ile (RefSeq) + no data
SO_t004 tRNA-Ala-1 tRNA-Ala (RefSeq) + no data
SO_r005 Sp23SB 23S ribosomal RNA (RefSeq) + no data
SO_r006 Sp5SB 5S ribosomal RNA (RefSeq) + no data
SO0208.1 SO0208.1 putative transposase (NCBI ptt file) - insig.
SO0211 SO0211 ISSod10, transposase OrfA (NCBI ptt file) - insig.
SO0213 murB UDP-N-acetylenolpyruvoylglucosamine reductase (NCBI ptt file) + no data
SO0214 birA birA bifunctional protein (NCBI ptt file) + no data
SO0215 panK pantothenate kinase (NCBI ptt file) - no data

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