Gene info for SO_r004 in Shewanella oneidensis MR-1

Name: Sp16SB
Annotation: 16S ribosomal RNA (RefSeq)
Type 3: 16S (small subunit) ribosomal RNA
Located on scaffold 139, + strand, nucleotides 216,788 to 218,316
See nucleotide sequence around SO_r004 or for all of scaffold 139

Other databases: MicrobesOnline

Nearby Genes

500 ntSO0204 and SO0205 are separated by 283 nucleotidesSO0205 and trmA are separated by 9 nucleotidestrmA and murI are separated by 55 nucleotidesmurI and SO0208 are separated by 6 nucleotidesSO0208 and Sp16SB are separated by 682 nucleotidesSp16SB and tRNA-Ile-1 are separated by 75 nucleotidestRNA-Ile-1 and tRNA-Ala-1 are separated by 138 nucleotidestRNA-Ala-1 and Sp23SB are separated by 274 nucleotidesSp23SB and Sp5SB are separated by 203 nucleotidesSp5SB and SO0208.1 are separated by 417 nucleotides SO0204: SO0204 - hypothetical protein (NCBI ptt file), at 212,225 to 212,884 SO0204 SO0205: SO0205 - hypothetical protein (NCBI ptt file), at 213,168 to 213,560 SO0205 SO0206: trmA - tRNA (uracil-5-)-methyltransferase (NCBI ptt file), at 213,570 to 214,670 trmA SO0207: murI - glutamate racemase (NCBI ptt file), at 214,726 to 215,634 murI SO0208: SO0208 - RNA-binding protein (NCBI ptt file), at 215,641 to 216,105 SO0208 SO_r004: Sp16SB - 16S ribosomal RNA (RefSeq), at 216,788 to 218,316 Sp16SB SO_t003: tRNA-Ile-1 - tRNA-Ile (RefSeq), at 218,392 to 218,468 tRNA-Ile-1 SO_t004: tRNA-Ala-1 - tRNA-Ala (RefSeq), at 218,607 to 218,682 tRNA-Ala-1 SO_r005: Sp23SB - 23S ribosomal RNA (RefSeq), at 218,957 to 221,849 Sp23SB SO_r006: Sp5SB - 5S ribosomal RNA (RefSeq), at 222,053 to 222,172 Sp5SB SO0208.1: SO0208.1 - putative transposase (NCBI ptt file), at 222,590 to 222,898 SO0208.1
Locus Name Description Strand Phenotype
SO0204 SO0204 hypothetical protein (NCBI ptt file) + insig.
SO0205 SO0205 hypothetical protein (NCBI ptt file) + insig.
SO0206 trmA tRNA (uracil-5-)-methyltransferase (NCBI ptt file) - sig.
SO0207 murI glutamate racemase (NCBI ptt file) + no data
SO0208 SO0208 RNA-binding protein (NCBI ptt file) - strong
SO_r004 Sp16SB 16S ribosomal RNA (RefSeq) + no data
SO_t003 tRNA-Ile-1 tRNA-Ile (RefSeq) + no data
SO_t004 tRNA-Ala-1 tRNA-Ala (RefSeq) + no data
SO_r005 Sp23SB 23S ribosomal RNA (RefSeq) + no data
SO_r006 Sp5SB 5S ribosomal RNA (RefSeq) + no data
SO0208.1 SO0208.1 putative transposase (NCBI ptt file) - insig.

Or browse nearby genes