Gene info for SO_A0052 in Shewanella oneidensis MR-1

Annotation: no description
Type 7: Pseudogene derived from a protein-coding gene
Located on scaffold 140, - strand, nucleotides 44,152 to 44,994
See nucleotide sequence around SO_A0052 or for all of scaffold 140

Other databases: MicrobesOnline

Nearby Genes

500 ntSO_A0177 and SO_A0178 are separated by 11 nucleotidesSO_A0178 and SOA0049 are separated by 184 nucleotidesSOA0049 and SOA0050 overlap by 1 nucleotidesSOA0050 and SOA0051 are separated by 1361 nucleotidesSOA0051 and SO_A0052 are separated by 61 nucleotidesSO_A0052 and SO_A0053 are separated by 66 nucleotidesSO_A0053 and SOA0054 overlap by 810 nucleotidesSOA0054 and SO_A0055 are separated by 8 nucleotidesSO_A0055 and SOA0056 are separated by 76 nucleotidesSOA0056 and SOA0057 are separated by 28 nucleotides SO_A0177: SO_A0177 - bacteriocin-like peptide (NCBI), at 38,327 to 38,530 _A0177 SO_A0178: SO_A0178 - bacteriocin-like peptide (NCBI), at 38,542 to 38,751 _A0178 SOA0049: SOA0049 - toxin secretion ABC transporter, ATP-binding subunit/permease protein, putative (NCBI ptt file), at 38,936 to 41,113 SOA0049 SOA0050: SOA0050 - toxin secretion, membrane fusion protein (NCBI ptt file), at 41,113 to 42,360 SOA0050 SOA0051: SOA0051 - hypothetical protein (NCBI ptt file), at 43,722 to 44,090 SOA0051 SO_A0052: SO_A0052 - no description, at 44,152 to 44,994 _A0052 SO_A0053: SO_A0053 - ISSod1, transposase OrfA (NCBI), at 45,061 to 46,220 _A0053 SOA0054: SOA0054 - ISSod1, transposase OrfB (NCBI ptt file), at 45,411 to 46,220 SOA0054 SO_A0055: SO_A0055 - no description, at 46,229 to 46,534 _A0055 SOA0056: SOA0056 - hypothetical protein (NCBI ptt file), at 46,611 to 46,793 SOA0056 SOA0057: SOA0057 - hypothetical protein (NCBI ptt file), at 46,822 to 47,049 SOA0057
Locus Name Description Strand Phenotype
SO_A0177 SO_A0177 bacteriocin-like peptide (NCBI) - strong
SO_A0178 SO_A0178 bacteriocin-like peptide (NCBI) - strong
SOA0049 SOA0049 toxin secretion ABC transporter, ATP-binding subunit/permease protein, putative (NCBI ptt file) - strong
SOA0050 SOA0050 toxin secretion, membrane fusion protein (NCBI ptt file) - strong
SOA0051 SOA0051 hypothetical protein (NCBI ptt file) + insig.
SO_A0052 SO_A0052 no description - insig.
SO_A0053 SO_A0053 ISSod1, transposase OrfA (NCBI) + no data
SOA0054 SOA0054 ISSod1, transposase OrfB (NCBI ptt file) + no data
SO_A0055 SO_A0055 no description + insig.
SOA0056 SOA0056 hypothetical protein (NCBI ptt file) + sig.
SOA0057 SOA0057 hypothetical protein (NCBI ptt file) + strong

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