Gene info for DVU0538 in Desulfovibrio vulgaris Hildenborough JW710

Annotation: AP endonuclease, family 2 (TIGR)
Type 1: Protein-coding gene
Located on scaffold 1944, + strand, nucleotides 609,243 to 610,031
See nucleotide sequence around DVU0538 or for all of scaffold 1944

Other databases: MicrobesOnline, NCBI, uniprot: Q72EN9

Nearby Genes

500 nthmcE and hmcD are separated by 21 nucleotideshmcD and hmcC are separated by 15 nucleotideshmcC and hmcB are separated by 0 nucleotideshmcB and hmcA are separated by 18 nucleotideshmcA and DVU0538 are separated by 389 nucleotidesDVU0538 and DVU0539 are separated by 17 nucleotidesDVU0539 and DVU0540 overlap by 17 nucleotidesDVU0540 and DVU0542 are separated by 297 nucleotidesDVU0542 and DVU0543 are separated by 21 nucleotidesDVU0543 and DVU0544 are separated by 22 nucleotides DVU0532: hmcE - HmcE, 25.3 kd protein in hmc operon (voordouw), at 604,012 to 604,692 hmcE DVU0533: hmcD - HmcD, 5.8 kd protein in hmc operon (voordouw), at 604,714 to 604,857 hmcD DVU0534: hmcC - HmcC, 43.2 kd protein in hmc operon (voordouw), at 604,873 to 606,039 hmcC DVU0535: hmcB - 40.1 kd protein in hmc operon (HmcB) (voordouw), at 606,040 to 607,152 hmcB DVU0536: hmcA - HmcA; high-molecular-weight cytochrome c (voordouw), at 607,171 to 608,853 hmcA DVU0538: DVU0538 - AP endonuclease, family 2 (TIGR), at 609,243 to 610,031 DVU0538 DVU0539: DVU0539 - sigma-54 dependent DNA-binding response regulator (TIGR), at 610,049 to 611,452 DVU0539 DVU0540: DVU0540 - sensor histidine kinase (TIGR), at 611,436 to 613,847 DVU0540 DVU0542: DVU0542 - universal stress protein family (TIGR), at 614,145 to 614,567 DVU0542 DVU0543: DVU0543 - conserved hypothetical protein (TIGR), at 614,589 to 615,698 DVU0543 DVU0544: DVU0544 - hypothetical protein (TIGR), at 615,721 to 616,122 DVU0544
Locus Name Description Strand Phenotype
DVU0532 hmcE HmcE, 25.3 kd protein in hmc operon (voordouw) - sig.
DVU0533 hmcD HmcD, 5.8 kd protein in hmc operon (voordouw) - insig.
DVU0534 hmcC HmcC, 43.2 kd protein in hmc operon (voordouw) - strong
DVU0535 hmcB 40.1 kd protein in hmc operon (HmcB) (voordouw) - cofit
DVU0536 hmcA HmcA; high-molecular-weight cytochrome c (voordouw) - strong
DVU0538 DVU0538 AP endonuclease, family 2 (TIGR) + insig.
DVU0539 DVU0539 sigma-54 dependent DNA-binding response regulator (TIGR) - sig.
DVU0540 DVU0540 sensor histidine kinase (TIGR) - strong
DVU0542 DVU0542 universal stress protein family (TIGR) + strong
DVU0543 DVU0543 conserved hypothetical protein (TIGR) + strong
DVU0544 DVU0544 hypothetical protein (TIGR) + strong

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